Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0090 |
Symbol | |
ID | 8412933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 98683 |
End bp | 99363 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645021657 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003179117 |
Protein GI | 257783900 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGATCC TAGTGGTAGA AGACGAAAAA GAACTTCTCG CCTCCATTGG AGAGGGTCTT GAGCTTGATG GCTATTACGT TGATCTTGTC GACAACGGCA CTCAGGCTCT TGAGATGGCT CAGCTTGAGC AATATGACCT CATCTTGCTT GACCTTAATC TTCCTGGCAT TGATGGTCTG GATTTACTGC GTACGCTTAG ATCGGAGCAC TCAGAGACTA AGGTATTGAT TCTTTCTGCG CGTTCATCAG TGTCTGATCG TATTGTTGGA CTGGATGCGG GTGCTGATGA CTATCTAATT AAGCCTTTTG CGTTTGGCGA GCTAGAAGCA CGTATTAGGA CGCTTTTGCG TCGTGAGTAT ATTCACGGAG AAGCTTCGTT GACATTAGGA GAACTTCGAT TTGATACTAC GGCTCGACAA GTTTTTGTTG GAGATGCTCA GGTCAACCTT ACCAAGAAAG AACTTGCGAT TTTGGAGTAT TTGATGCGAA ATGCCGGGGC GGTTGTAAGC AGTGAAGAGT TGATGGCTCA TGCATGGGAC AGCAACGTGG ATTTATTTAG TAATTCCGTG CGTGTTCACA TTTTCTCTAT TAGAAAAAAG TTGCGAGAAG CTCTTGGATA TGACCCAATT TCCAACAAAG TAGGAGAGGG TTATTGCTTT AAGAAGGATA GCGATGATTA A
|
Protein sequence | MKILVVEDEK ELLASIGEGL ELDGYYVDLV DNGTQALEMA QLEQYDLILL DLNLPGIDGL DLLRTLRSEH SETKVLILSA RSSVSDRIVG LDAGADDYLI KPFAFGELEA RIRTLLRREY IHGEASLTLG ELRFDTTARQ VFVGDAQVNL TKKELAILEY LMRNAGAVVS SEELMAHAWD SNVDLFSNSV RVHIFSIRKK LREALGYDPI SNKVGEGYCF KKDSDD
|
| |