| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0084 |
|---|
| Symbol | |
|---|
| ID | 8412927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 93286 |
|---|
| End bp | 94287 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645021651 |
|---|
| Product | asparagine synthetase AsnA |
|---|
| Protein accession | YP_003179111 |
|---|
| Protein GI | 257783894 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2502] Asparagine synthetase A |
|---|
| TIGRFAM ID | [TIGR00669] aspartate--ammonia ligase, AsnA-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA TTCCCGAGGG CTACCGTTCA AGCCTTTCCC TCTACGATAC ACAGAAAGCT
ATTGAGCAGG TCAAGAACGT ATTTCTGACC AAACTGTGCG CTGCACTGAA GCTGTCGCGT
GTCACTGCAC CGCTCATCGT TGATCCGCTT ACTGGCATGA ACGACAACCT CAATGGTGTC
GAGCATCCCG TTGCCTTTGA TCTACCTAAC GTTGGCAAAG ACGCCGAGGT AGTTCAGTCG
CTTGCTAAGT GGAAGCGCTA TGCACTGTGG CGCTACAACT TTGCCGTCGG CCGCGGCCTG
GTTTGCGATA TGAACGCTAT CCGTCGCGAT GAACAACCCG ATAACCTGCA CTCCATTTAC
GTGGACCAGT GGGACTGGGA ACGCATCATT ACGCAGGACG AGCGCAATAC CGATACGCTA
GAAGACGCTG TCTGCCGCAT TGTCGAGGCA ATCTGCGGTA CGCTCGACGA GCTCAAATGG
CACTATCCCC AGCTCAACAC ACAGCTTAGC CGAGAAGTTA CCTTTGTAAC CTCGCAAGAG
CTCGAGGACC TCTACCCTAC TCAGACGTCT AAACAGCGAG AAAATCTGTT TGTTCGCGAA
CATCCAACCA CGTTTATCGT GGGCATTGGT GGTGCCTTAA ACTCTGGCCA ACCTCACGAT
TTTAGGTCTC CCGACTACGA CGATTGGTCA CTCAACGGCG ACCTGCTGTT CTGGGATGAG
ACCTTAGACT GTGCTGTTGA GATTAGCAGT ATGGGCATTC GCGTTGATGC CGAGGTACTT
AAGTCGCAGC TGGCAATCGC TGGATGCGAA GACCGCCTTA AGCTGCCGTT CCATAAGATG
CTTATTGACG GTGAGCTGCC TTTTACCATT GGCGGTGGAA TTGGCCAAAG CCGTCTCTGC
ATGCTACTAC TAGAAAAAGC GCACGTTGGA GAGGTGCAGG CGTCTATTTG GGACAAGAAG
ACTGAAGAAC GTTGTGCAGA AGCAGGGGTT TCTCTGCTTT AA
|
|---|
| Protein sequence | MTKIPEGYRS SLSLYDTQKA IEQVKNVFLT KLCAALKLSR VTAPLIVDPL TGMNDNLNGV
EHPVAFDLPN VGKDAEVVQS LAKWKRYALW RYNFAVGRGL VCDMNAIRRD EQPDNLHSIY
VDQWDWERII TQDERNTDTL EDAVCRIVEA ICGTLDELKW HYPQLNTQLS REVTFVTSQE
LEDLYPTQTS KQRENLFVRE HPTTFIVGIG GALNSGQPHD FRSPDYDDWS LNGDLLFWDE
TLDCAVEISS MGIRVDAEVL KSQLAIAGCE DRLKLPFHKM LIDGELPFTI GGGIGQSRLC
MLLLEKAHVG EVQASIWDKK TEERCAEAGV SLL
|
|---|
| |