| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0078 |
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| Symbol | |
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| ID | 8412921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 87861 |
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| End bp | 89258 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021645 |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003179105 |
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| Protein GI | 257783888 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATC AGCTTCCTAA AGACTTTTTC TTTGGCGGGG CTATGTCTGG CCCACAAACT
GAAGGCAGAT GGCAAGATGA CGGAAGAATC CCTAGCATTT GGGATACTTG GTCTAACCTT
GACATCACCG CTTTTCACAA CCGCGTAGGG TCTTATGGTG GCAATGATTT TAGCAGCAGA
ATGGAAGAGG ACTTTGAGCT TCTTAAGTCA ATAGGAATGG ACTCAGTTCG TACTTCTATC
CAGTGGAGTC GCCTTTTAGA TATCGATGGA AACCTTAATC CAGAGGGTGA GAGGTACTAT
CATCAGCTCT TTGCTACAGC AAAGAAGGTT GGTATTGAGA TTTTTGTAAA TCTCTATCAC
TTTGATATGC CTGAATACCT CTTCAATCGC GGTGGTTGGG AGTCTCGCGA GGTAGTTGAG
GCATATGCGC ATTATGCACG TATTGCGTTT GAGACTTTTG GTAAAGAGAT TCGTTACTGG
TTTACTTTTA ATGAGCCAAT TGTTGAGCCT GAGATGCGCT ATACCGTTGG CGGATGGTTC
CCTTTTGTAA AGAATTATTC CCGCGCTCGT GCTGTTCAGT ACAATATTTC GCTTGCTCAT
GCGCTTGGTG TCCGCGAGTA TCGTCGCGCA AAAGCAGCAG GTTTTATGCT TGAGGATTCT
CGCATTGGTC TTATCAATTG CTTTGCACCA CCATATACCA AAGACAATCC ATCAGAAGCA
GACCTTGAGG CGCTGCGTAT GACCGATGGC GTTAACATTC GCTGGTGGCT TGACCTAGTT
ACTAAGGGAG AACTCCCACA GGATGTCATT GATACGCTGC AGTCTCGTGG TGTTGACCTG
CCTATTCGCC CTGAGGATAA GCTCATTCTT GCCGATGGAG TTGTGGATTG GTTGGGCTGC
AATTATTACC ATCCAGAGCG TATTCAGGCT CCTGCAAAAG ATACTGATGA AAATGGCATT
CCAAACTTTG CTGACCCGTA TGTTTGGCCA GAAGCAGAGA TGAATGTTTC TCGTGGTTGG
GAAATTTACC CACAAGGTCT TTACGACTTT GCTATGAAGG TTCGCGATGA ATATCCAGAG
CTTGAGTGGT TTGTTTCTGA GAATGGCATG GGTGTTGAGC GAGAAGATCT TAAAAAAGAT
GAAAACGGTG TAATTCAGGA CGACTACCGT GTTGATTTTG TTCGTCGCCA TCTTGAGTGG
ATTGCCCGTG CAATTCAGGA CGGCGCAAAA TGTCGTGGTT ACCACTACTG GGCCATCATT
GATAACTGGT CTTGGGCAAA TGCTTTCAAG AACCGTTATG GCTTTATTGA GGTAGATCTG
GAAGATAACT ACAACCGTCG TCTTAAGAAA TCAGCTAAGT GGCTTAAACA AATTGCCACT
ACACATATAG TTGACTAG
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| Protein sequence | MQYQLPKDFF FGGAMSGPQT EGRWQDDGRI PSIWDTWSNL DITAFHNRVG SYGGNDFSSR
MEEDFELLKS IGMDSVRTSI QWSRLLDIDG NLNPEGERYY HQLFATAKKV GIEIFVNLYH
FDMPEYLFNR GGWESREVVE AYAHYARIAF ETFGKEIRYW FTFNEPIVEP EMRYTVGGWF
PFVKNYSRAR AVQYNISLAH ALGVREYRRA KAAGFMLEDS RIGLINCFAP PYTKDNPSEA
DLEALRMTDG VNIRWWLDLV TKGELPQDVI DTLQSRGVDL PIRPEDKLIL ADGVVDWLGC
NYYHPERIQA PAKDTDENGI PNFADPYVWP EAEMNVSRGW EIYPQGLYDF AMKVRDEYPE
LEWFVSENGM GVEREDLKKD ENGVIQDDYR VDFVRRHLEW IARAIQDGAK CRGYHYWAII
DNWSWANAFK NRYGFIEVDL EDNYNRRLKK SAKWLKQIAT THIVD
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