| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0059 |
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| Symbol | |
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| ID | 8412901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 63091 |
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| End bp | 65166 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021625 |
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| Product | small GTP-binding protein |
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| Protein accession | YP_003179086 |
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| Protein GI | 257783869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA AAAATGTTTC TAAGGTAAAG AATGTGGTCC TGGTGGGCCA AGGTGGCGTG
GGCAAAACCA TGCTTGCCGA GGCAATGCTG CATCTGACGG GTGCAACAAC TCGTTTAGGC
GGCCACGCAG GCACAAAGCC CACGCTTGAT TACGATTCAC AAGAGTCAGA GCGCGGATTT
TCTATCTCTA CTACTATCGC ACCAATTACC TGGGAAAATA CGCGAATTAA CGTGCTTGAC
GCACCTTGTT ATCCTGACTT TGTGGGTGAC GCCTATTCGG CAATGAGCGC TGTTGAAACT
GCGCTGTTTG TCGTTGATGC AGCTAGTGGA CCCGGCACCA TAACTACTAG GCTTTGGTTT
GCTGCTGAGG ACCTTTCTCT GTCTCGTGCA TTGTTCATTA ATCGCCTGGA CCGTCCTGAT
GCAGACTACG AGACTGCAAT GGCTATGCTT CAGGACCGTT TTGGTTCTTC GCTTGGAGCG
GTGACCATTC CAATGGGTTC TGGTGAGGCA TTTTCTGGCA TTATTGACGT TGTTCATCAG
AAGGCTCGTA AGCTGGTAGA TGGCAAGCCT GAGGTCACTG ACATTCCTGC CGAGTTCCAA
GCAGAGGCAG AAGCTGCTCG ATCCGCTCTA ACTGAGTTGG TTGTTGAAGC CGATGATGAG
CTTATGATGC GCTATCTTGA GGGCGGAGAG ATTACGCAGG AAGAGCTTGA GAGCCTGCTG
GGTAAGGCCC TTATGGAGCG CATTTTTGTT CCTGTTTTCT CCGGTTCTTG TGTTCACGAA
GAGGGTGTCA TCTCTCTACT CGACGCTATT GATGGCTGGT TCCCAACCAT GTCCGATTTT
GGTCGCATTC CGCTGGTTAA CGGCGAGCAG CTTGATATTT CACCTGATGA TGAGCGTCCT
GTTGCGTTTG CTTTCAAGTC GTTGCAGGAT TCACAAAACG GCAAGCTTAC GTTTGTGAAA
GTCCTGGCGG GTACCATTTC TGCAGGCGAC GAGCTTATCA ACGCGCGTAC TCGCAAGCCT
GAGCGCCTTT CTCACTTGTA TCGCATGTGT GGTAAAGAGA CGTCTGACGT CAGCATCGCC
GCAGCTGGCG ATATCGTAGT AGTTCCAAAG CTCGAGGCTA TGACGGGTGA TACGCTTTCC
GTTACTGGCA AGGTTGAGGC TGCTGCATTT AGGTTCCCTA ACTCTCTGTA TCGCACGGCT
ATTGAGCCTG ATGAGCGCGG TACCGAGGGC AAACTCTTTG CATTTTTGGA GAAGGCAGCC
GACGCCGATC CAACTCTTAA GGTTGAACGC GATGAGGACA CCGGACAGAC CATTGTGTCT
GCAATTGGTG AGGCACAAGT AGCTGTTCTT CTCGAGCGTC TTGAGCAGCG AGCCGGCGTT
TCTGCGCATA AAGTTGCGCT CCGCATCCCG TATCGCGAGA CGATCCGTCG AGTTGCAAGT
GCTCAGGGTA GGCACAAGAA GCAGACTGGC GGTTCCGGCC AGTACGGCGA CTGCTGGCTG
CGTATTGAGC CAAACCCAGA CGCAGGCTAC GAGTTTGTCG ACGAGGTTGT AGGCGGGCAT
ATTCCACGCG GCTTCATCCC CGCTATTGAT AAGGGCGTTC AGGAGACCAT GCGTGAAGGC
GTTTTGGCTG GTTATCCTAT GATTGACATC AAGGTTGCCG TTTACGAGGG CTCTTACCAT
CCAGTTGACT CTAACGAGAT GGCTTTCAAG ACTGCTGCCC GCATTGGTTT CCAAAAGGCT
GTTGAACAGG CAGAACCTGT TTTGTTGGAG CCTATGGCTC ACCTGGAGAT TACCGTTCCA
GACAGCTATG CGGGTTCCGT TATGGGCGAT GTCTCCGCTT CCCGTGGTCG CGTTGAGGGA
ATGTCTTCTG GCACCGGTGT TTCCGCTGGT GAGACTACTA TTAAGGCGAC GATTCCATAC
GCTGAGGTTA CCGATTATGC TACAAGACTG AGGTCCCTCT CGCGAGGAAC GGGTGAGTAT
ACCGTTGAGC TGTCAGGATA TGAGCAGGTA CCACATGATA TCCAGGCTCG TCTAGCTGCA
GAGTATGCCG AGCGTCGCGC CGCCGGTGAG CGCTAA
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| Protein sequence | MAEKNVSKVK NVVLVGQGGV GKTMLAEAML HLTGATTRLG GHAGTKPTLD YDSQESERGF
SISTTIAPIT WENTRINVLD APCYPDFVGD AYSAMSAVET ALFVVDAASG PGTITTRLWF
AAEDLSLSRA LFINRLDRPD ADYETAMAML QDRFGSSLGA VTIPMGSGEA FSGIIDVVHQ
KARKLVDGKP EVTDIPAEFQ AEAEAARSAL TELVVEADDE LMMRYLEGGE ITQEELESLL
GKALMERIFV PVFSGSCVHE EGVISLLDAI DGWFPTMSDF GRIPLVNGEQ LDISPDDERP
VAFAFKSLQD SQNGKLTFVK VLAGTISAGD ELINARTRKP ERLSHLYRMC GKETSDVSIA
AAGDIVVVPK LEAMTGDTLS VTGKVEAAAF RFPNSLYRTA IEPDERGTEG KLFAFLEKAA
DADPTLKVER DEDTGQTIVS AIGEAQVAVL LERLEQRAGV SAHKVALRIP YRETIRRVAS
AQGRHKKQTG GSGQYGDCWL RIEPNPDAGY EFVDEVVGGH IPRGFIPAID KGVQETMREG
VLAGYPMIDI KVAVYEGSYH PVDSNEMAFK TAARIGFQKA VEQAEPVLLE PMAHLEITVP
DSYAGSVMGD VSASRGRVEG MSSGTGVSAG ETTIKATIPY AEVTDYATRL RSLSRGTGEY
TVELSGYEQV PHDIQARLAA EYAERRAAGE R
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