| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0055 |
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| Symbol | |
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| ID | 8412897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 58519 |
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| End bp | 59505 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021621 |
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| Product | band 7 protein |
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| Protein accession | YP_003179082 |
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| Protein GI | 257783865 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AAAAAATTAT CAAATCCAAG AGTGGTTGGC TATTTTTGCT GATTGCTATT
GCTCTTTTTG TAATAGCAGT CCTGTTTTTG GCAAATTTTG TGATTAGCGC TATAGCTGCA
GATAGAAATC CTCGCCTGGA GCCATCGGTC CCAAGCATTA TTGGTGCGTT GGTTTTCTTC
TTTGCTGGTT TGTTTGTTTC AAGCGGCTTG TTTAGTCTTC AGCCTGGTCA GGCAAGGGTT
TGCGTGTTGT TTGGTAAGTA CATCGGAACC GTTAAGGACG AGGGCCTTCG CTGGGCAAAT
CCTTACTACG CTAAGACTCT GTCCGCAGGC AACCTTTCCA CTCTTGTCAC AGTTGGAGAC
ACTTCTAGCG TAAACGTGCA CACCTCTATC ATTTCTACTC GTGCTCGCAC GTTGAATGGC
GATGTCCTCA AGGTTAATGA TCGCATGGGC AATCCAATCG AGATTGCTGA GGTAGTTGTT
TGGCGTGTCA GCGATACCGC AAAGGCTCTC TTCGATGTGG ATGATTACGA TAGCTACGTT
GCTATGCAGG CAGAGACTGC ACTTAGGCAC GTCGCTAGCA TTTACAGCTA CGACCACATG
GAGGATGAAT CCGAGTCTAA TACCGCAATT ACCTTGCGTT CCAACATCGA GGAAGTCTCC
GAGGCTCTTC AGTCTGAGTT GAGCCGCAAC CTTTCCGTTG CCGGTATTAC TGTCGACGAC
GCCCGTCTCA CACATCTCTC TTATGCTCCT GAAATTGCAC AGGCAATGCT CCGTCGCCAG
CAGGCAGAGG CCATCATTGC CGCACGTAAG AAGATCGTTG AGGGTGCCGT TTCCATGGTT
GACATGGCTC TCACTCAGCT TTCCGAGAAT GGCGTTGTTG AGTTTGATGA AGACCGTAAG
GCCGTTATGG CTTCTAACCT TATGGTTGTT CTCTGCGGCG AGTCTGAGGC TCAGCCTGTG
CTTAACACTG GTTCTTTGCA GCAGTAA
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| Protein sequence | MSTEKIIKSK SGWLFLLIAI ALFVIAVLFL ANFVISAIAA DRNPRLEPSV PSIIGALVFF
FAGLFVSSGL FSLQPGQARV CVLFGKYIGT VKDEGLRWAN PYYAKTLSAG NLSTLVTVGD
TSSVNVHTSI ISTRARTLNG DVLKVNDRMG NPIEIAEVVV WRVSDTAKAL FDVDDYDSYV
AMQAETALRH VASIYSYDHM EDESESNTAI TLRSNIEEVS EALQSELSRN LSVAGITVDD
ARLTHLSYAP EIAQAMLRRQ QAEAIIAARK KIVEGAVSMV DMALTQLSEN GVVEFDEDRK
AVMASNLMVV LCGESEAQPV LNTGSLQQ
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