| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0041 |
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| Symbol | |
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| ID | 8412883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 46515 |
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| End bp | 47288 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645021608 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003179069 |
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| Protein GI | 257783852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTAAAA CGGCTTTGGT TACGGGAGCG TCAAGCGGTC TTGGCCTTGA GTTCTCAAAG
ATCTTTGCGG AGAACGGCTA CGACCTTGTA GTTGTCGCAA GAAATGAGGG TAGGCTCTAT
CAGCTCAAAG GCGACCTTGA AGAGACATAT GGCATCACGG TCTGGGTCTG TGCCTCGGAT
CTCTCTCGGG AAGGTGCAGC CCTCGATGTC TTTGATTTTT GTATGGAAGA AGGCATCGCC
ATAGACTGCC TTGTCAACAA TGCGGGTTTT GGGGACCAAG GCGACTTTTC AAATGCAGAC
TGGCAAAGGC AACACGACAT GGCCCAGGTC AACATGGTGG CTCTGATGCA GATGACCAAA
TGCTTCATTA AGCCGATGCT TGAGCGGGGT GGCGGCAAGA TATTGAACAT CTCGTCCGTG
GCGGCTTTTT CGGCAGGGCC GAAAATGTCT GTGTATTACG CGTCCAAAGC GTTCGTCCGC
AGCTTTTCCG AAGCGGTCTC CGAGGAGGTG AGGGGAAGCG GCGTTACCGT AACCGCCCTC
TGCCTCGGTC CTGCCGCCAC GGGATTCGAA AAGGCAGCGG GGCTGGAGGC CTCCAAAATG
TTCACCTTCT TCAGGCCTGC TTCAGCAAGG GATGTGGTCC TCTCCGGATA TCGCGCGATG
ATGCGTGGGG TCACCTTAAG ATACTACGGG GCCCCCACGA AGCTCATGAA TATCGGCTCC
CGTCTTGTTC CCCGCATCGT GGCAAGAAAG TTCGCAAAAT ACGTAAACGG ATAG
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| Protein sequence | MGKTALVTGA SSGLGLEFSK IFAENGYDLV VVARNEGRLY QLKGDLEETY GITVWVCASD
LSREGAALDV FDFCMEEGIA IDCLVNNAGF GDQGDFSNAD WQRQHDMAQV NMVALMQMTK
CFIKPMLERG GGKILNISSV AAFSAGPKMS VYYASKAFVR SFSEAVSEEV RGSGVTVTAL
CLGPAATGFE KAAGLEASKM FTFFRPASAR DVVLSGYRAM MRGVTLRYYG APTKLMNIGS
RLVPRIVARK FAKYVNG
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