Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0034 |
Symbol | |
ID | 8412876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 42281 |
End bp | 43369 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645021603 |
Product | phosphoribosylformylglycinamidine cyclo-ligase |
Protein accession | YP_003179064 |
Protein GI | 257783847 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTT CCGCTGATCC AACCAAGCAG ATTACTTACG CTGACGCAGG CGTTGACGTT GATGAGGGCG CCCGTGCGGT TGACGCCATT AAAGCTGCTG TTGCTACAAC TACTCGCCCT GAGGTCATTG GTAGCCTGGG TGGTTTTGGC TCTTGTTTCT CGGCCGCTGC ACTTAAGGAC ATGGAAGAGC CTGTGCTGGT TAGTGGTACT GATGGCGTTG GTACTAAGCT TGCTATTGCC CAGCTGCTTA ACCGTCACAA CACGGTAGGC GAGGACCTGG TTGCAATGTG CGTTGACGAC ATTGTTCCTA TGGGTGCCGA GCCTCTGTTC TTCTTGGACT ATGTAGCTGT GGGTAAGCTT AAGGCTGGAG CGGTCGCTGA GATTGTTGGC GGTATTGCAG AGGGTTGCCG TAAGAGTGGC TGCGCTCTGG TAGGTGGTGA GATGGCTGAG CATCCAGGCG TTATGAATCC CGACGATTAT GATTTAGCTG GCTTTGTTGT AGGCGTTGTT GACAAACCAA AAATTTTAGG TCCCGAGAAG GTCAGCGAAG GTGACATTAT TCTGGGACTT CCTTCTTCTG GTATCCATTC AAATGGATAT TCCTTGGTGC GTAAAGTTGT TATCGAAGGC AAGACTGTTG AAGAGCTTAA TCAGCCACTC GAGGAACTTA ACGGTGAATC TCTTGCAGAC GCTGTTTTGC GTCCAACCAC TATTTATGCA GGTGGATTGC TTGCAGCTCT TCGTGCAGGA GCGCCTATCA AGGCTATGGC ACATATTACT GGTGGCGGAA TCACCGAGAA CCTCAATCGC GCGCTACCAG CTCACCTTGA TGCTGAGGTT GATCGTGGTG GGGAAGCTGG CCCTGCGTGG TCTATTCCGC CTGTTATCTC ATATGTTTCT AACGCTGCAA ACCTATCTCT TGATGAGCAG TATCGTACAT TCAATATGGG TGTTGGCATG GCTCTTATTG TGGATATGGA TGATGTTGAC GATGTGGCGG AAGCTCTTTC TGATCAGGGA TTTGAACCAT TTATCATAGG CCAGATTATC CCAGGCACCG GAAAGGTGGT CTACAACGAT GCCGATTAA
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Protein sequence | MTTSADPTKQ ITYADAGVDV DEGARAVDAI KAAVATTTRP EVIGSLGGFG SCFSAAALKD MEEPVLVSGT DGVGTKLAIA QLLNRHNTVG EDLVAMCVDD IVPMGAEPLF FLDYVAVGKL KAGAVAEIVG GIAEGCRKSG CALVGGEMAE HPGVMNPDDY DLAGFVVGVV DKPKILGPEK VSEGDIILGL PSSGIHSNGY SLVRKVVIEG KTVEELNQPL EELNGESLAD AVLRPTTIYA GGLLAALRAG APIKAMAHIT GGGITENLNR ALPAHLDAEV DRGGEAGPAW SIPPVISYVS NAANLSLDEQ YRTFNMGVGM ALIVDMDDVD DVAEALSDQG FEPFIIGQII PGTGKVVYND AD
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