Gene Apar_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0034 
Symbol 
ID8412876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp42281 
End bp43369 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content50% 
IMG OID645021603 
Productphosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_003179064 
Protein GI257783847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTT CCGCTGATCC AACCAAGCAG ATTACTTACG CTGACGCAGG CGTTGACGTT 
GATGAGGGCG CCCGTGCGGT TGACGCCATT AAAGCTGCTG TTGCTACAAC TACTCGCCCT
GAGGTCATTG GTAGCCTGGG TGGTTTTGGC TCTTGTTTCT CGGCCGCTGC ACTTAAGGAC
ATGGAAGAGC CTGTGCTGGT TAGTGGTACT GATGGCGTTG GTACTAAGCT TGCTATTGCC
CAGCTGCTTA ACCGTCACAA CACGGTAGGC GAGGACCTGG TTGCAATGTG CGTTGACGAC
ATTGTTCCTA TGGGTGCCGA GCCTCTGTTC TTCTTGGACT ATGTAGCTGT GGGTAAGCTT
AAGGCTGGAG CGGTCGCTGA GATTGTTGGC GGTATTGCAG AGGGTTGCCG TAAGAGTGGC
TGCGCTCTGG TAGGTGGTGA GATGGCTGAG CATCCAGGCG TTATGAATCC CGACGATTAT
GATTTAGCTG GCTTTGTTGT AGGCGTTGTT GACAAACCAA AAATTTTAGG TCCCGAGAAG
GTCAGCGAAG GTGACATTAT TCTGGGACTT CCTTCTTCTG GTATCCATTC AAATGGATAT
TCCTTGGTGC GTAAAGTTGT TATCGAAGGC AAGACTGTTG AAGAGCTTAA TCAGCCACTC
GAGGAACTTA ACGGTGAATC TCTTGCAGAC GCTGTTTTGC GTCCAACCAC TATTTATGCA
GGTGGATTGC TTGCAGCTCT TCGTGCAGGA GCGCCTATCA AGGCTATGGC ACATATTACT
GGTGGCGGAA TCACCGAGAA CCTCAATCGC GCGCTACCAG CTCACCTTGA TGCTGAGGTT
GATCGTGGTG GGGAAGCTGG CCCTGCGTGG TCTATTCCGC CTGTTATCTC ATATGTTTCT
AACGCTGCAA ACCTATCTCT TGATGAGCAG TATCGTACAT TCAATATGGG TGTTGGCATG
GCTCTTATTG TGGATATGGA TGATGTTGAC GATGTGGCGG AAGCTCTTTC TGATCAGGGA
TTTGAACCAT TTATCATAGG CCAGATTATC CCAGGCACCG GAAAGGTGGT CTACAACGAT
GCCGATTAA
 
Protein sequence
MTTSADPTKQ ITYADAGVDV DEGARAVDAI KAAVATTTRP EVIGSLGGFG SCFSAAALKD 
MEEPVLVSGT DGVGTKLAIA QLLNRHNTVG EDLVAMCVDD IVPMGAEPLF FLDYVAVGKL
KAGAVAEIVG GIAEGCRKSG CALVGGEMAE HPGVMNPDDY DLAGFVVGVV DKPKILGPEK
VSEGDIILGL PSSGIHSNGY SLVRKVVIEG KTVEELNQPL EELNGESLAD AVLRPTTIYA
GGLLAALRAG APIKAMAHIT GGGITENLNR ALPAHLDAEV DRGGEAGPAW SIPPVISYVS
NAANLSLDEQ YRTFNMGVGM ALIVDMDDVD DVAEALSDQG FEPFIIGQII PGTGKVVYND
AD