| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0030 |
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| Symbol | |
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| ID | 8412872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 37975 |
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| End bp | 38844 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021599 |
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| Product | Phosphomethylpyrimidine kinase type-1 |
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| Protein accession | YP_003179060 |
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| Protein GI | 257783843 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
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| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA CCAACTCCGT TCTGTACCAG CGAGAAAGCT CGTACATCCC CCGTATTGCC
GCAGTGCATG ACCTCTGTGG ATACGGAAAA TGCTCGCTTG GTATAGCCAT TCCGGTGCTT
TCTGCAGCGG GATGTGACGT TTGTCCAGTG CCTACATCTC TTTTCTCGGC ACACACCAAG
TTCCCTACGT TCTACATGCA TGACACCACC AACATGCTCG AGGATTATCT TGATGCATGG
CAGGAAGAAG GCATTGACCT GGACGCTATT TATTCTGGCT TCCTTGGCGC TGCAGAGCAG
GTTGCAAGCA TTCAACGTTT ATATCAGGAG CATCCAAAAG CACTTCGCAT TGTTGATCCA
GTTATGGGCG ATGGCGGCAA GATGTATCCA ACATATACGC AAGAGCTTTG TGACGCAATG
AAATCCCTGG TAAACGGTGC CGATATTCTG ACACCAAACC TTACAGAAGC TTCGATTCTA
ACTGGTATTC CTTACGCTGG TCAAAATTTA ACTGACGAGC AAGTAAATGA ACTACTCGAC
GCGTTACTTG AAATGGGTGC AAAGTGCGTT GTTCTTAAGG GTATTGTTCG CAATGATAAT
CTTATCCGCA ACTTTGTTGC TACCGAGTCT GAGCGCGGTG AAATTGTTTC CGAGCTTCTG
CCATACATGC TGCACGGAAC CGGCGATCTG TTTGCTTCTG CACTTTTAGC TGCAGTTATG
TGTGGCCAGG AAATTGCTGA CGCTGTCGAG TTTGCTGGTG AGTTTGTTTG CGAGTCCATG
GAGATTACTC GTGAGCAGCC AAACTTTGAG CTTCGCGGTG TTTCGTTTGA AACAAAGCTT
GGCCTGATTA CTCAGCTTCT GCAAGAGTAG
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| Protein sequence | MNETNSVLYQ RESSYIPRIA AVHDLCGYGK CSLGIAIPVL SAAGCDVCPV PTSLFSAHTK
FPTFYMHDTT NMLEDYLDAW QEEGIDLDAI YSGFLGAAEQ VASIQRLYQE HPKALRIVDP
VMGDGGKMYP TYTQELCDAM KSLVNGADIL TPNLTEASIL TGIPYAGQNL TDEQVNELLD
ALLEMGAKCV VLKGIVRNDN LIRNFVATES ERGEIVSELL PYMLHGTGDL FASALLAAVM
CGQEIADAVE FAGEFVCESM EITREQPNFE LRGVSFETKL GLITQLLQE
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