| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0028 |
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| Symbol | |
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| ID | 8412870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 34874 |
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| End bp | 36721 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021597 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179058 |
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| Protein GI | 257783841 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATC GTTCTTCTCG TCCTGTATTT GGTCGCTCTT TGGCCTCAGC TTCTAACAGA
AACGGATTTG GTAACAACGC TTCTGGCAAA CATCGCAAAT CGCTGTTTGC CAGTTTTCTT
TCTTATTACG CTCCGCAAAA ACATCTGTTC ATTCTGGACA CTATTTGCGC CATTATTTTG
GCTTGTATTG AACTCGCGTT TCCTCAGATT CTGCGATCGC TCACAAAAGG TCTGTTTACA
CAGGGTAAAG ATGTCATTTT AGCCAGCCTT GGATTTATTA CCGTTGGCCT TGTTGTTATG
TACTTTGTTC ACTTTCTGTG CCGCTATTTT GTCATTAGCT GGGGACACAT CATGGGTGCG
CGCATGGAAA GCAAAATGCG AGAAGACCTA TTTGACGCAT ACGAGCGCAT GAGTTTCTCG
TATTATGACC GACATAAGAC GGGCGACTTG ATGAGTCGTC TGGTATCCGA TTTGTTTGAT
ATTTCTGAGA CAGCACACCA CGGTCCTGAG TACCTGATTA TCGGCTTGCT TGAGATTGCT
GGTTCTTTTG TTATCCTGGC TTTTATTAAC GTGCCTCTTA CGCTGGTACT TGCTGGAATT
GCCGCTGTTC TTGTGGTGTT TAATTTCTTT GCCAATATGC ATATGCGGGG AATCTTTAAA
GAGAACCGCA TGCGTATTTC TGATGTGAAT ACTCAGTTAG AGGACTCGCT TTCTGGCATT
CGCGTGGTTA AGGGCTTTGC GGCAGAAGAT CACGAGCGTA AGAAATTTAG AGCAAGCAAT
TCGGCGTATT TAGACTCCAA GGCCAACATG TACCGAGCTA TGGGTAGGTA TCAAGCTGCT
ATTTCGGGCA TGATGGGTGT TTTGAATACC GTTGTGTTGG TTTTGGGCGG TTGGATGATT
GCTCAGGGTC AGATGCAAGC AATTGATTTG GCCACCTACG CGCTTTACAT TTCGTTGTTT
ACTACGCCAA TCATGAATAT TTTGAACTTT ACCGAGACGT TCCAGAAAGG ACTTGCTGGC
TTCAAGCGTT TCATGGAAAT TCTTAAAACC CAGCCGGATA TTCAAGACGC ACCTGCTGCC
AAGGATATTC AGATTTCAGC TGGAGAAATC ATCTACCAAG ACGTTCATTT CTCTTACGAC
AATGCTGAAG ATGTTATTGA CGGTTTAAAT CTTCATATTG AGAGCGGAAA AACCGTTGCT
CTGGTTGGCC CTTCAGGCGG AGGTAAGTCA ACTACCTGTG CTTTATTGCC ACGATTCTAC
GACGTAACAA GCGGAAGTAT CACTATTGAC GGTCAGGATA TTCGTTCCGT TACACAGCAC
AGTTTACGTT CGGCAATTGG TATGGTTCAA CAAGACGTGT ATCTTTTCGA CGGCACCATC
GCTGAGAATA TTGCGTATGG TTGTCCTGAA GCTTCTGCAG AAGCTATTGC GCTAGCAGCC
AAACGAGCAA ACATCGCAGA GTTTATTGAG TCGTTGCCAG ACGGATATAA CACGCAGGTA
GGGCAGCGTG GAACAAGGCT TTCTGGTGGA CAGAAGCAGC GCATTTCTAT TGCGCGTGTA
TTCCTGAAAA ACCCTCCGCT GCTCATTTTG GACGAAGCAA CTTCTGCTTT GGATAACGAA
TCCGAGCGCG CAGTTCAGGA ATCTCTTTCC GAATTGGCAA AGAACAGGAC TACGCTGGTC
ATTGCTCACC GTCTCTCAAC AATTATGGGT GCTGATGAAA TTATCACTAT TGATCATGGT
CGTGCAGTTG AGCGTGGAAC CCACAATGAG CTGCTAGAAA AAGGTGGAAT TTACGCTCAT
TACTATCAAA TGCAGTTTGG TGGTGCGCCA AATCCTACAA GGCGGTAA
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| Protein sequence | MSNRSSRPVF GRSLASASNR NGFGNNASGK HRKSLFASFL SYYAPQKHLF ILDTICAIIL
ACIELAFPQI LRSLTKGLFT QGKDVILASL GFITVGLVVM YFVHFLCRYF VISWGHIMGA
RMESKMREDL FDAYERMSFS YYDRHKTGDL MSRLVSDLFD ISETAHHGPE YLIIGLLEIA
GSFVILAFIN VPLTLVLAGI AAVLVVFNFF ANMHMRGIFK ENRMRISDVN TQLEDSLSGI
RVVKGFAAED HERKKFRASN SAYLDSKANM YRAMGRYQAA ISGMMGVLNT VVLVLGGWMI
AQGQMQAIDL ATYALYISLF TTPIMNILNF TETFQKGLAG FKRFMEILKT QPDIQDAPAA
KDIQISAGEI IYQDVHFSYD NAEDVIDGLN LHIESGKTVA LVGPSGGGKS TTCALLPRFY
DVTSGSITID GQDIRSVTQH SLRSAIGMVQ QDVYLFDGTI AENIAYGCPE ASAEAIALAA
KRANIAEFIE SLPDGYNTQV GQRGTRLSGG QKQRISIARV FLKNPPLLIL DEATSALDNE
SERAVQESLS ELAKNRTTLV IAHRLSTIMG ADEIITIDHG RAVERGTHNE LLEKGGIYAH
YYQMQFGGAP NPTRR
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