Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0025 |
Symbol | |
ID | 8412867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 30608 |
End bp | 31888 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645021594 |
Product | adenylosuccinate synthetase |
Protein accession | YP_003179055 |
Protein GI | 257783838 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.993316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCTT CCGTACTTGT TGGTGCTCAG TGGGGAGACG AGGGTAAGGG TAAAGTTACC GACCTCATTT CCGGAGATTT TGATGTTGTT TGCCGTTATG CGGGCGGTGC AAATGCAGGC CACACGGTAA TTGCTGGAGA CACAAAGCTT GCACTTCACC AGGTGCCATC GGGCGTTATG TATGAGAACA CCTATCCAGT TATTGGTAAT GGTTGCATTG TTGATCCTGA GGTTCTTCTC GGCGAGATTG ACATGCTGGA GAGCAAGGGT ATTTCTTGCG ACTTGCTTAA GATATCTGGT AATGCTCATA TTGTTATGCC TTACCACAAA GATCTTGATG GCGTGCACGA GAAGAAGCTA GGCAAGAACC TTATTGGTAC CACTAAACGC GGTGTCGGTC CAACTTACAT GGACAAGATG AACCGTACTG GCCTGCGTAT TCAGGACATG CTTGACGAGA AAATCTTCCG CAAGAAGCTT GAGGCTGCAC TTGAGTACAC CAATCCAATC TTGAGTCTTG TGTATGGCTT GCCAACCTAT ACCGTTGACC AGATTTGTGA GACGTATCTG CCTTATGCAG ATCGTATTCG TCCTTATATT GTTGAGTCTT CTCTTTTTCT TAATGAAGAG CTTGAGGCTG GAAAGAACAT CCTCTTTGAG GGTGCTCAGG CAACTATGCT TGATATCGAC CACGGAACCT ATCCATTTGT TACTTCTTCT AATTGCACCG CTGGAGGTGC GGTAACTGGT TCTGGTGTTG GTCCAACCAA TATTGACCGC GTCTTGGGCA TTGCAAAGGC ATACCTCACA CGCGTCGGCT CTGGTCCATT TCCAACAGAG CTTTTTGACG AGACGGGCAA TCTTCTTGGT GAAGTTGGTC ACGAATACGG TGTAACTACT GGTCGTAAGC GCCGCTGCGG TTGGTATGAC GCAGTAGTTG TTAACTACGC AGCACGTATT AATGGTCTCA CTGACCTAGC AATTACAAAG CTTGACGTTC TCGGCTGCCT TGATGAGATT AAGGTTTGCG TTGCTTATGA GTGCGACGGT AAGATCTATA AAACCGTTCC TGAACACCAG AGCGTTTTCT ATCATGCAAA ACCTGTGTAT GAGACTCTTT CTGGTTGGAA GTGCGACATT TCTAACGTTC GCAATTTCTA TCAGCTGCCT CGTGAAGCTA AGGACTACAT TGATTTCCTG GAACAGCTTG CTGGTGTACG CGTTTCTATC ATCACTGTTG GTCCAGATCG CGAGCAGACA ATCGATCGCT ACTGGAGGTA A
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Protein sequence | MPASVLVGAQ WGDEGKGKVT DLISGDFDVV CRYAGGANAG HTVIAGDTKL ALHQVPSGVM YENTYPVIGN GCIVDPEVLL GEIDMLESKG ISCDLLKISG NAHIVMPYHK DLDGVHEKKL GKNLIGTTKR GVGPTYMDKM NRTGLRIQDM LDEKIFRKKL EAALEYTNPI LSLVYGLPTY TVDQICETYL PYADRIRPYI VESSLFLNEE LEAGKNILFE GAQATMLDID HGTYPFVTSS NCTAGGAVTG SGVGPTNIDR VLGIAKAYLT RVGSGPFPTE LFDETGNLLG EVGHEYGVTT GRKRRCGWYD AVVVNYAARI NGLTDLAITK LDVLGCLDEI KVCVAYECDG KIYKTVPEHQ SVFYHAKPVY ETLSGWKCDI SNVRNFYQLP REAKDYIDFL EQLAGVRVSI ITVGPDREQT IDRYWR
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