Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0022 |
Symbol | |
ID | 8412864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 26911 |
End bp | 27969 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645021591 |
Product | hypothetical protein |
Protein accession | YP_003179052 |
Protein GI | 257783835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0276256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAC CGGATTCAAA CATTCCTCAG GCACCTGAAG GGTATTCTCG CCCAGAGAGT AGCTCGCAGA ATTTTGCCGG TCCAAGTAAC CAAAACGGAG GCAAGCCGCG TCTGTTTGAG GCTCCAACTT ATAAGCAAGG CTTTATGCTT TGCGTTATTG GTGGAGTTAT TACTGGGTTC CTTTCTTTTA TTGGAGCTGC TCTGGTTGCT TATGGCATGG TAATTGCTGT CTATTGCAAA AAGGGGCACG GATGGTTTGG TCCCGCTATC ACTTCGGTGT TTATTACGGG TGTGGTAGCT TATTTGCTTT CGGGACCAAC AGAGGCGGCA ACTTCGGTTA CTGCTTGTGC ACTTGCTCTT GGAGTTGGCT GCGCTTTTGC AACAGAGAAG CTCACCGTTG GTGTTGGATC TCTTCTTGTG GGAGCAACAG CTTTGGCACT TCTGGGGTAC GATGCGTTCT TCGCTACAAT TGCAGGAACA ACTCTGCCCG AGCTTGCTCA GAACGTATTT AATCAATACG CTTCACAGGT CTCAAGTGCT TCTCCAGAGA TCCAAGAGGG TCTTTCAACT GCAAGGTCAC TCTTTATGCT CTTTTGGCCA ACCAGCTATA CCGGTATGGC GCTTTTATAT TTTGTAATTG CGCGTTTTGG AGCTCGAACA GTGTATAAAG CGCTGACAAG AGACCCACAG AAGTTGCCAC AGTTCCAGCT AATGGATGTT CCCTTTTGGA TGTGCGCTCT TACGGTGGCC AACTTGTTTG TGTATGCACT TTCAAGCACC ATTTTGCCTG CACAAGACGT GCTTCAGCTT ATTACGCTGA ATGTATTTAT GGCCCTTAGA GTTGTTTTTG CTCTTCAAGG TCTCGCAGTG CTCACGTGGT TTGTGTGCGA GAAACACTGC TCACCAGCAC TTTCTCTGTC ACTGTTTGTA TTGGCAGGCA TGTTAGAAGT TCAGTTAGGC GTTATGGCTC TTGTAGGACT TATTGACGCC TGGGCAAACT TTCGAAAACT TGATCGCTCA GGAAGCCAGG ATTCAGAGCC TACGATAAAC AACAACTAG
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Protein sequence | MDRPDSNIPQ APEGYSRPES SSQNFAGPSN QNGGKPRLFE APTYKQGFML CVIGGVITGF LSFIGAALVA YGMVIAVYCK KGHGWFGPAI TSVFITGVVA YLLSGPTEAA TSVTACALAL GVGCAFATEK LTVGVGSLLV GATALALLGY DAFFATIAGT TLPELAQNVF NQYASQVSSA SPEIQEGLST ARSLFMLFWP TSYTGMALLY FVIARFGART VYKALTRDPQ KLPQFQLMDV PFWMCALTVA NLFVYALSST ILPAQDVLQL ITLNVFMALR VVFALQGLAV LTWFVCEKHC SPALSLSLFV LAGMLEVQLG VMALVGLIDA WANFRKLDRS GSQDSEPTIN NN
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