Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0015 |
Symbol | |
ID | 8412855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 20261 |
End bp | 20719 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645021582 |
Product | hypothetical protein |
Protein accession | YP_003179045 |
Protein GI | 257783828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00241722 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA ACGACGAACG CAAGGATGGA GTTTCTCCTG AGCTTGATAT GCTCTCAACC GAGCTGCTTG GAGACGCGTT TGACCTGCTT GCAGATGGAC AATCGCTTAA CGTTTTGCTT GTAGTTGAGG ATGCATTAGG GACTGTTGCA AGTTATGAGT TCTCTGATGA CGGTCCAGAA GAGCTACTTG AAGGCGCCCA CAAGCGCGTG CTTGACCTGG TCAGACAGAA GGGCAATAAA GAAGCAGGGC TTGAAGAACC TGTGCGCTAT GCGCTTGTGT ACGAGGGGGC CATTCAACTA CTCAAAGATG GTGGTTATGA AGATGCTGTA CTCCTTGAGT TTGGCGAGAA GGGCTACAAG AGTTTCTCGG CATATTCTTT AATTTACGGA AAAGGTCAAG GCGACCAGTT TGTATGGTCC GATCCTGCCC CGGCAGGGGA GCTTGAGCCA CTTCTGTAA
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Protein sequence | MSENDERKDG VSPELDMLST ELLGDAFDLL ADGQSLNVLL VVEDALGTVA SYEFSDDGPE ELLEGAHKRV LDLVRQKGNK EAGLEEPVRY ALVYEGAIQL LKDGGYEDAV LLEFGEKGYK SFSAYSLIYG KGQGDQFVWS DPAPAGELEP LL
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