| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0010 |
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| Symbol | |
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| ID | 8412850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 13169 |
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| End bp | 14878 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645021578 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003179041 |
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| Protein GI | 257783824 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.290045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAT CCCAAAGCGC TCGACTTGAG CGAAAAAAAC TTCTTGGCGA TCCAATTTTG
ATAACGACCA TTGTCGTTCT TATCGCCTTC TTAACCCTTT TTATTTTGTA TCCACTTGCC
ATTCTTATGG TTGACTCTGT GGTCTCTGAT AATGGGATTA CGCTTGATGT ATTTACGCGC
ATTCTATCCA TGCCTTCGTT TGATCGCGCA ATTACCAATA CGCTCAGAGT TGGTTTTGCG
GTAGGTATTT TGTCAGCGCT TATTGGTCTT CTTTTTGCTT ATGTTGAAGT TTACGTAAAG
CTTCGTACAA AGTTTATGAC AGGACTTTTC CGCGTGGTTT CTATGCTTCC TGTTGTTTCT
CCTCCATTTG TTCTCTCACT TTCCATGATT ATGATGTTTG GTAAGAAGGG CCTTATTACT
CGAGGTCTTT TAGGAATTTT TGACAACAAC ATCTATGGAT TCTGGGGCAT TTTTATTGTT
CAGACCATGT CGTTTTTCCC TGTGTGTTAC ATGATGCTTA AGGGCTTGCT TAAAAACATT
GATCCTTCTC TTGAAGAAGC AGCACGTGAC ATGGGTGCAA GCCGCTGGAA AGTATTTACT
AGTGTTACGC TTCCTCTTAT TTTGCCTGGT TTGGGTAATG CCTTTCTCGT TTCATTTATA
GAATCAATCG CAGACTTTGC TAATCCAATG ATTATTGGCG GTTCTTACGA TACGTTGGCA
ACAACTATCT ACCTGCAAAT TACGGGTGCG TACGATAAGC AGGGTGCGGC TGCTATGGCT
GTTGTTCTTC TTTCAATTAC GTTGCTCATG TTTGTTGTTC AGAAGTTTGT ATTGGAAGCA
AAGAGTACGT CTACGCTTTC CGGTAAAGCA ACGCGCGCTA GGATGCTTAT TACAGACAAC
TCTGTTCGCA TTCCACTTAC CATCCTTTGC GCATTGGTAG CGCTCTTTGT TATTGGCATG
TATCTCTGTG TTCCTTACGG TTCATTTGTT CGTTCCTGGG GCTCTAATTA TGAGTTAACC
ACTAAATGGT TTGAGCAGGT ATTTACCAAG TACCATGGAT TACAGGCGTT TAGTGACTCA
TTTATGCTCT CGCTTATTGC AGCACCAATT ACCGCTTTGC TTTCAATGAT TATTTCTTAT
CTGGTAGTAA AACGTCGTTT CCGTTTCCGT GGTTTTATCG AGGCTGTATC TATGCTTGCT
ATGGCAGTTC CTGGTACGGT TTTAGGCGTT GGCTATATTC GCGGTTTCTC AAGTGGTGTC
ATGCATACAG GATTCTTGCA AGGCCTGTAT GGTACAGGAC TTATTCTGAT TATTGTCTTT
GTAGTGCGTT CGCTTCCCAC AGGAACACGT TCGGGTATCT CAGCACTCCG ACAAATTGAT
AAATCTATTG AAGAGTCTGC GTACGATATG GGTGCCGATA GTTTTACGGT GTTCATGACC
GTTACACTGC CACTGATTAA AGATTCGTTT TTGTCGGGCT TGGTAACGGC GTTTGTTCGT
TCCATAACAG CAATCTCTGC AGTTATTCTC TTGGTCACAC CAGAGTTCCT GCTCATCACC
GTTCAGATTA ATGAGTTTGC AGGTAAGGGT TCATACGGTA TGGCCTGCGC CTTTGCAACA
ATCTTGATTG TTATTACCTA TGGCTCGGTA TTGCTTATGA ATTGGGCCAT CAAACACTTT
GGCACCAGCC GAGCACTCAA GGAGGAGTAA
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| Protein sequence | MAKSQSARLE RKKLLGDPIL ITTIVVLIAF LTLFILYPLA ILMVDSVVSD NGITLDVFTR
ILSMPSFDRA ITNTLRVGFA VGILSALIGL LFAYVEVYVK LRTKFMTGLF RVVSMLPVVS
PPFVLSLSMI MMFGKKGLIT RGLLGIFDNN IYGFWGIFIV QTMSFFPVCY MMLKGLLKNI
DPSLEEAARD MGASRWKVFT SVTLPLILPG LGNAFLVSFI ESIADFANPM IIGGSYDTLA
TTIYLQITGA YDKQGAAAMA VVLLSITLLM FVVQKFVLEA KSTSTLSGKA TRARMLITDN
SVRIPLTILC ALVALFVIGM YLCVPYGSFV RSWGSNYELT TKWFEQVFTK YHGLQAFSDS
FMLSLIAAPI TALLSMIISY LVVKRRFRFR GFIEAVSMLA MAVPGTVLGV GYIRGFSSGV
MHTGFLQGLY GTGLILIIVF VVRSLPTGTR SGISALRQID KSIEESAYDM GADSFTVFMT
VTLPLIKDSF LSGLVTAFVR SITAISAVIL LVTPEFLLIT VQINEFAGKG SYGMACAFAT
ILIVITYGSV LLMNWAIKHF GTSRALKEE
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