| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2966 |
|---|
| Symbol | |
|---|
| ID | 8412519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2848360 |
|---|
| End bp | 2849178 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645021313 |
|---|
| Product | Deoxyribonuclease V |
|---|
| Protein accession | YP_003178778 |
|---|
| Protein GI | 257389005 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.178945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCCG CTCGACCCGA GTTCGTCCCC GATCCGGCGC TCTCGCGCGG CGAGATGGAG
TCGCTCCAGC GAGAGATCGC CGCCGAGGCG ACGTTCGCGG ACGACCTCGG CTTCGATCCG
GCGGCGCTCC GGTCCGACCC CGAGCAGCAC AGACTGGGCG AGGATGTCGG GGACGGCTCT
GACAGCGCGC CAGCGCAGCC GCTGGTCGCG GGCGTCGACC AGGCCTTCGT CGACGACGTG
GCGGTCTCGG CGGTCGTCGT CAGCCGCGGC GACGAGGTCG TCGAACGCGT CCACGCCGCC
GTCGAGACGG AAATCCCCTA CATTCCGGGG CTGCTCTCCT TTCGCGAGGG CGGGGCGATC
CTCGCGGCGC TCGGGGAACT ACGACGGACG CCGGACCTGC TGGTCGTCGA CGGCAGCGGC
CGCATCCACT TTCGGGAAGC CGGGCTGGCG ACCCACGTCG GCGTCCTGTT CGACGTGCCC
GCGATCGGCG TCGCCAAGAG CCTCCTCTGT GGCCGGCCCC GAGAGTCGCT CGACGGGAAA
CTCTCGGTCG GAACGACCGT CGGAATCGAG GCCGACGACA GCGTCGAGAC GGCCACGCCG
GGGGCGCTGA TCGGCCACGC CGTCCAGACC CGACAGTACG ACTCGCCCAA GCGCCACGTC
AATCCGCTGT ACGTCAGCCC CGGCCACCGC GTCGGGGCCG AGACTGTCCC CGAGCTCGTG
CTCGCGACCA CGGCCGGCTA CAAGCTCCCG GAGCCGACGC GGCTGGCCGA CAGCGACGCC
GACGAGGCGA AGGCCGCAGT GCGAGACGAT CGGGCCTGA
|
|---|
| Protein sequence | MEPARPEFVP DPALSRGEME SLQREIAAEA TFADDLGFDP AALRSDPEQH RLGEDVGDGS
DSAPAQPLVA GVDQAFVDDV AVSAVVVSRG DEVVERVHAA VETEIPYIPG LLSFREGGAI
LAALGELRRT PDLLVVDGSG RIHFREAGLA THVGVLFDVP AIGVAKSLLC GRPRESLDGK
LSVGTTVGIE ADDSVETATP GALIGHAVQT RQYDSPKRHV NPLYVSPGHR VGAETVPELV
LATTAGYKLP EPTRLADSDA DEAKAAVRDD RA
|
|---|
| |