| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2932 |
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| Symbol | |
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| ID | 8412485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 2819374 |
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| End bp | 2820171 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645021279 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003178744 |
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| Protein GI | 257388971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00976663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGT TCGGTCTGAT CGGGAACCCG GTCGGTCACT CGCTGTCGCC GCCGATGCAC
GAAGCGGCCT ACGAACAGCT CGACATGGAC GCTCGCTACG TCACCTTCGA ACCGGACGAA
GACGCGGCCG CCGCCGCCAT CGAGAGCGCC CGGACGCTGG GAATCACGGG TCTGAACGTT
ACGATCCCGT TCAAGCAGGC GGCCTTCGAG GCCGTCGACC CGGATCCGCT GGCCCGGCGG
ATCGGTGCGG TCAACACGGT CGACCTGACC GGCGACGAGC CGCGGGGATA CAACACGGAC
GCCGTCGGTG CCGTGCGCGC GCTCCGCCGT CACGACGTGG CCCTCGACGG CACCGCAGTC
GTGGTCGGCG CGGGCGGTGC CGGCCGGGCG GTCGCGTTCG GGCTGGCCGA CGAGGGGATG
TCCGTCCGGA TCGCCAACCG GACCGTCGAG CGCGCTCACG ACCTCGCCGC GGACGTGCCG
GGGGCGACCG GCCACGGACT CGACGAACTG CACGACACCG TCGCCGACGC GGACGTGCTG
GTCAACTGCA CCAGCGTCGG GATGGACGAG GACGCGACCC CGGTGCCGGC CGACGCCCTC
CACGGCGATC TGTCCGTCCT CGACGCCGTC TACTCGCCGA TCGAGACGCG ACTGCTCCGG
GACGCCGCCG CCGCCGGTGG GACGACCGTC GACGGCGCGT GGATGCTCCT GTTCCAGGGC
GTCGAAGCCT TCGAGCGCTG GACCGGCCTG GATGCACCGG TCGATCACAT GAACGACGCG
CTCCGCGATC GCCTGTGA
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| Protein sequence | MDVFGLIGNP VGHSLSPPMH EAAYEQLDMD ARYVTFEPDE DAAAAAIESA RTLGITGLNV
TIPFKQAAFE AVDPDPLARR IGAVNTVDLT GDEPRGYNTD AVGAVRALRR HDVALDGTAV
VVGAGGAGRA VAFGLADEGM SVRIANRTVE RAHDLAADVP GATGHGLDEL HDTVADADVL
VNCTSVGMDE DATPVPADAL HGDLSVLDAV YSPIETRLLR DAAAAGGTTV DGAWMLLFQG
VEAFERWTGL DAPVDHMNDA LRDRL
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