| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2756 |
|---|
| Symbol | |
|---|
| ID | 8412307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2646453 |
|---|
| End bp | 2647883 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645021101 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003178568 |
|---|
| Protein GI | 257388795 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.1976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.927782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG GCCAGACCTC GTTCGTCACG TTCGTCTCCA AGTTTCTCGC TTCTGGCGCG
GGGTTCGTCG GGACCATCGT GTTCGCCCGG CTGCTGGGCG CGGACGTGCT GGGTCGGTAC
TACCTGTTGC TCTCGATCGT CGCGTGGCTG GCCCTCGCCG GGACGCTGGG CTTCGAGAGC
GCGATCGCCA AACGGCTGAG CGAAGGCGAG GATCGGGGTG CCTACAAGGT CGCTGGCGGG
CTCTGTATGG CCGCGCTGAC GGGCTCGATC GTCGTCCTCC TCTTCCTCGG CGAGGGGCTG
GTCGAGCAGT TGTTCGACAT CCGTCGGGTC GAGTTCGTCG CGGTCTTGCT GCTCGTCGGC
GTGGCGAGTT CGTACGTCGA CTCGATGCTG AACGGCGTCC ATCTGGTCCA CGTCGCGTCG
TCGCTGCGGC CGGTCCGACA GATCGTCCGG ACCGCTCTGC AGGTCGGCGG TATCCTGCTG
TCGTTCGGGC TGGCCGCGCT CGTCTACGGC TACGCGGCCG GGAGCCTCGT CGTCGTCGTC
GTCGGGCTGT ACTTCGTCGG CCGTCCGTAC CGACTGCCGA CGCGGGCACA CTTCGAGAGC
CTCTACGAGT ACGCGAGGTA CGCCTGGCTC GGGCGCATCC GGGGCAAGAC GTTCAACCAG
GCAGACGTAC TGGTCCTCGG TGTCTTCGTC TCCGACGAGC TCGTGGGCGT CTACGCGATC
ACGTGGAGCC TCGCGAACTT CCTCATCATC TTCAGCAACG CTATCAGCTC GGCGCTGTTC
CCGGAGCTGA GCAAGCTCTC GGCCGAGGAC AGCTTCGAGC GGGTGTCGTC GCTGGTCGAG
GACTCGTTCG CCTACGCGGG CCTGTTCACG ATTCCGGGGC TGGTCGGCGG GGTCCTGTTG
AGCGATCGCC TCTTGCAGAT CTACGGCTCG GAGTTCCTCA AGGGGACCGA GGTGCTGTGG
CTACTCATCG TCGCCGTCCT CGTCTACGGC TACCAGAGCC AGATCGTCAA CGCACTCAGC
GGCATCGACC GGCCCGGCGA GGCGTTCAAG GTCAACGCCG TCCTCGTCGT GTCCAACGTC
GTCCTCAACT TCGCGCTGAT CTGGCAGTAC CGTATCCGCG GAGCGGCGGT CGCGACCGCG
ACGTCGGTCG TCCTGAGCTT CGTCGTCGGC TACTTCGTCC TGCGGAGCCA CGTCTCGGTC
TCGCTCCCGG TCAAACGGAT CGGGACGCAG GTGGTCGCCG CCGCCGGGAT GGGCGTCGTC
GTCGCGACCG TCGAACGGGT CGCACGACCG GTCTTCCCGC TGGTCGATCC CACCGCGACG
GCAGCGCTGC TGGTCGTGGT GGGCGCGCTG GCGTACTTCG CCCTTCTCTG GGCGCTCTCC
GGAGAGTTCA GGACGGTCGT CCGCGAGAAC GCGCCCGCGA TCGGGCTCTG A
|
|---|
| Protein sequence | MRIGQTSFVT FVSKFLASGA GFVGTIVFAR LLGADVLGRY YLLLSIVAWL ALAGTLGFES
AIAKRLSEGE DRGAYKVAGG LCMAALTGSI VVLLFLGEGL VEQLFDIRRV EFVAVLLLVG
VASSYVDSML NGVHLVHVAS SLRPVRQIVR TALQVGGILL SFGLAALVYG YAAGSLVVVV
VGLYFVGRPY RLPTRAHFES LYEYARYAWL GRIRGKTFNQ ADVLVLGVFV SDELVGVYAI
TWSLANFLII FSNAISSALF PELSKLSAED SFERVSSLVE DSFAYAGLFT IPGLVGGVLL
SDRLLQIYGS EFLKGTEVLW LLIVAVLVYG YQSQIVNALS GIDRPGEAFK VNAVLVVSNV
VLNFALIWQY RIRGAAVATA TSVVLSFVVG YFVLRSHVSV SLPVKRIGTQ VVAAAGMGVV
VATVERVARP VFPLVDPTAT AALLVVVGAL AYFALLWALS GEFRTVVREN APAIGL
|
|---|
| |