Gene Hmuk_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2730 
Symbol 
ID8412281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2619458 
End bp2621917 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content65% 
IMG OID645021076 
ProductDNA gyrase, A subunit 
Protein accessionYP_003178543 
Protein GI257388770 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG AAGCACCTGA CCCCGACGAT CCGCAGGCGG CATCGCGCGT CGACCGCGTC 
CGCATCGAGG ACGAGATGGA ACAGAGCTAC ATCGACTACG CGATGAGCGT CATCGCCGGT
CGTGCGCTCC CGGACGTTCG CGACGGGCTC AAGCCCGTCC ACCGCCGGAT CCTCTACGCG
ATGCACGAGA TGGGCGTCTC CTCGCGCTCG GCTCACCGCA AGTCCTCCTC GATCGTCGGG
GAGACGATGG GTGATTACCA CCCCCACGGA GACAGCGCGA TCTACGACAC ACTCGTCCGG
ATGGCCCAGC CGTTCTCGAT GCGGTATCCG CTCGTGGACG GACAGGGGAA CTTCGGCTCG
ATGGACGGCG ACCCCGCGGC CGCGATGCGC TACACCGAGG CCCGGATGTC GCCGATCTCT
GAGGAGTTGC TCGCCGACAT CGAGAAAGAC ACCGTCGACT TCCAGTCGAA CTACGACGAC
CGACTCCGGG AGCCGGAGGT CCTGCCGTCG GCGATGCCGA ACCTGCTGGT CAACGGTTCC
TCGGGAATCG CCGTCGGGAT GTCGACGAAC ATCCCACCAC ACAACCTCGG CGAGGTGATC
GACGCGACGG TCCACCTCAT CGACAACCCC GACTGCGAGG TCGAGGACCT GATGGACCAC
GTCAAGGGAC CGGACTTCCC GACCGGCGGC AACATCGTCG GCAAGGACGC CATCTACTCG
GCGTACGCGA CGGGTCGCGG TCGCCTCCGC GTCCGGGCGG ACTACGAGGT CGATCCCGAG
GAGAACCGGA TCGTCGTCAC CGAGATCCCG TACCAGGAGA ACAAGGCCCG GATGGTCGAG
CGGATCGCCG AAGACGTCAA CGAGGGCGTC ATCGAGGGGA TCGCGGACCT CCGCGACGAG
TCGGACCGCA ACGGCGTCCG CATCGTCGTC GAGCTCAAGC GCGGCGCGAA CGTCGACGTG
GTCGAGAACC AGCTCTTAGA GAGCCACCTC GAATCGACCT TCGGCGTCAT CAACCTCGCC
TTAGTCGACG ACGAGCCCCG CGTGCTCACG CTCAAAGAGA CGCTCGAACA CTACGTCGCG
CATCGCAAGG AGGTCGTGCG TCGGCGCTCG CAGTTCGAAC TCGACGAGGC TCAGGACCGC
GCACACATCC TCGAAGGTCG CCTGAAGGCG CTGCAAAACG TCGACGACGT GGTCGAGCTG
ATCCAGGACT CGGAGGACCG CGACGAGGCG CGCACCGAGC TACGGAGCCA GTTCGACTTC
TCCGAGGAAC AGGCGGCCCA CATCGTCCGG ATGCAGCTTG GCTCGCTCAC GTCGATGGAG
ACCGCGGAGA TCGAGTCGGA GTACGAGGAC GTACAGGCCC GAATCGAACG GCTCCAGACG
ATCCTCGACT CCGAGGACGA ACTGCTGACG GTCATCAAAG ACGAGCTCCG CGAGATCAAA
GCGGAGTACG ACGACGACCG CAAGACCTCG ATCCTCGAAG CCGAGGGCGA GGTCACCCAC
GAGGATCTCA TCCCCGAGGA AGACTGCGTC GTCGTCATCA CGGAAGACGA CTACATCAAG
CGGATGCCCG TCGACGCCTT CGACGCCCAG AACCGGGGCG GCAAGGGGAT CATCGGCTCG
GACCCCAAGG ACGGCGACCG CGTCTCGAAG GTCTTCCGGG CGAACAGCCA CGACTACCTG
CTCTGTTTCA CCAATCAGGG ACAGGTCTAT CGCCTGAAGA CCTACGAGAT TCCGGAGATG
TCCCGCACCG CCAGGGGCAA GTCGGCGGTC AACATCATCG ACCTCGGCGA CGACGAGGAG
ATCACCGCCG TGGTCTCGAC GGACGACTTC GAGGAAGACG AGTGCCTGAC GATGGTCACT
CGTAACGGCT ACGTCAAGCG CACCTGCGTC GACGAGTTCG AGAACATCCT CTCGACGGGG
ATCATCGCCG CGAAGCTCGA AGACGGCGAC GCACTGGTCG ACGTGGAGGT CACCGACGAC
AGCGGCGATC TGGTCGTCGC CACCGAGGGC GGGATGACGA TCCGCTTCGA CGAGTCGGAG
GTCCGCGAGA TGGGACGCTC GGCCCGCGGT GTCCGCGGGA TCGACCTGCA AGACGGCGAC
AAGGTGGCTG CGATGGTCGC GACGGACGAC CACGACGACC GCGCACTCCT GACCGTCACC
GAGAACGGGT ACGGGAAGCG CACCCTCCTC GCCGAGTACA GCAAACAGTC CCGCTACGGC
AAGGGCCTGA TCGACATCAA GACCGACGAT CGCAACGGCC GCGTCGCGAC GGCGAAGGCG
GTCCGCGAGG ACGACCACCT CGTCATCATG AGCGAGAGCG GCCAGATCAT GCGCATCCCC
GCGGGCGACG TGTCACAGGT CGGCCGCAAC ACGAAGGGCG TCAAGATCAT GGCACTCGAC
GGGGTGGACA ACGTGGCGAG CGTGACGGTA GTGCCCGCCG AGGTCGAAAA CGACGAGTAG
 
Protein sequence
MSSEAPDPDD PQAASRVDRV RIEDEMEQSY IDYAMSVIAG RALPDVRDGL KPVHRRILYA 
MHEMGVSSRS AHRKSSSIVG ETMGDYHPHG DSAIYDTLVR MAQPFSMRYP LVDGQGNFGS
MDGDPAAAMR YTEARMSPIS EELLADIEKD TVDFQSNYDD RLREPEVLPS AMPNLLVNGS
SGIAVGMSTN IPPHNLGEVI DATVHLIDNP DCEVEDLMDH VKGPDFPTGG NIVGKDAIYS
AYATGRGRLR VRADYEVDPE ENRIVVTEIP YQENKARMVE RIAEDVNEGV IEGIADLRDE
SDRNGVRIVV ELKRGANVDV VENQLLESHL ESTFGVINLA LVDDEPRVLT LKETLEHYVA
HRKEVVRRRS QFELDEAQDR AHILEGRLKA LQNVDDVVEL IQDSEDRDEA RTELRSQFDF
SEEQAAHIVR MQLGSLTSME TAEIESEYED VQARIERLQT ILDSEDELLT VIKDELREIK
AEYDDDRKTS ILEAEGEVTH EDLIPEEDCV VVITEDDYIK RMPVDAFDAQ NRGGKGIIGS
DPKDGDRVSK VFRANSHDYL LCFTNQGQVY RLKTYEIPEM SRTARGKSAV NIIDLGDDEE
ITAVVSTDDF EEDECLTMVT RNGYVKRTCV DEFENILSTG IIAAKLEDGD ALVDVEVTDD
SGDLVVATEG GMTIRFDESE VREMGRSARG VRGIDLQDGD KVAAMVATDD HDDRALLTVT
ENGYGKRTLL AEYSKQSRYG KGLIDIKTDD RNGRVATAKA VREDDHLVIM SESGQIMRIP
AGDVSQVGRN TKGVKIMALD GVDNVASVTV VPAEVENDE