Gene Hmuk_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2679 
Symbol 
ID8412229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2563439 
End bp2564392 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID645021024 
ProductTranscription factor TFIIB cyclin-related 
Protein accessionYP_003178492 
Protein GI257388719 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.616816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCC CCACCCGCCA GCGCGAGCAC GACGGGACGC AGGAGCAGGA GACGGAAGAA 
TCCGAGCAGA CCTGTCCTGA GTGTGACTCG ACGGCAATAT CGACGGACGG GAGCGGCGAA
CTCATCTGCG AAGACTGCGG ACTCGTCATC GAAGATGAGA ACATCGACCG CGGCCCGGAA
TGGCGCGCGT TCAACCATTC TGAACGGCAG AGCAAGTCCC GCGTCGGGGC ACCGACGACC
CAGACGATGC ACGACAAGGG GCTGACGACG ACGATCGACT GGAAGGACAA GGACGCGTAC
GGCCGGTCCA TCTCGTCGAA GAAGCGGTCC CAGATGCACC GACTGCGAAA GTGGCAGGAG
CGAATCCGGA CGAAGGACGC GGGGGAGCGA AACCTCCAGT TTGCCCTCTC GGAGATCGAT
CGGATGGCGT CGGCACTGGG CGTTCCTCGT TCGGTGCGAG AAGTCGCGTC GGTGATCTAC
CGGCGCGCGC TGGACGAGGA CCTCATCCGC GGCCGTTCCA TCGAGGGCGT CGCGACCTCC
TGTCTGTACG CCGCCTGCCG ACAGGAAGGC ATCCCACGGA GCCTCGAAGA GGTCTCGGAC
GTCTCTCGGG TCGAGCAAAA GGAGATCGGG CGCACGTATC GCTACGTCGC CCAGGAGCTC
AAGCTCAAGA TGGAGCCGGT CGACCCCAAA CAGTACGTGC CGCGCTTCGC CAGCGAACTC
GAACTGAGCG AGGAGGTCCA GTCGAAGGCC AACGAGATCA TCGACGTGAC CGCCGAGCAG
GGCCTGCTGT CGGGCAAGTC CCCCACGGGC TACGCCGCGG CGGCGATCTA CGCCGCGTCG
CTGCTGTGCA ACGAGAAGAA GACCCAGCGA GAGGTCGCCG ACGTCGCCCA GGTGACCGAA
GTGACGATCC GGAACCGCTA CCAGGAACAG ATCGAAGCGA TGGGCATCCA CTGA
 
Protein sequence
MERPTRQREH DGTQEQETEE SEQTCPECDS TAISTDGSGE LICEDCGLVI EDENIDRGPE 
WRAFNHSERQ SKSRVGAPTT QTMHDKGLTT TIDWKDKDAY GRSISSKKRS QMHRLRKWQE
RIRTKDAGER NLQFALSEID RMASALGVPR SVREVASVIY RRALDEDLIR GRSIEGVATS
CLYAACRQEG IPRSLEEVSD VSRVEQKEIG RTYRYVAQEL KLKMEPVDPK QYVPRFASEL
ELSEEVQSKA NEIIDVTAEQ GLLSGKSPTG YAAAAIYAAS LLCNEKKTQR EVADVAQVTE
VTIRNRYQEQ IEAMGIH