Gene Hmuk_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2513 
Symbol 
ID8412057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2412707 
End bp2413474 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID645020854 
ProductMIP family channel protein 
Protein accessionYP_003178328 
Protein GI257388555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT ACATCGCGGA AGCCATCGGT ACTGCGATCC TCATCATCTT CGGTGGCGGT 
GTCGTCGCTA ACGTCGTCCT CAACGAGACG AAAGGGCACG AAAGCGGTTG GATCGTCATC
ACGTGGGGAT GGGCTATCGG TGTGTTCATG GGCGTGTTCA CGATCAGTCA GGTCAGCGGC
GGTCACATCA ATCCCGCCGT GACGATCGGA CTGGCTGCGG CCGGATTGTT CGACTGGGCA
CAGGTCCCGA TCTACATCGC CGCTCAAACG CTCGGGGCGT TCCTGGGTGG TGTGGTGGTC
TGGCTGGCGT ACAAGGATCA CTTTGCCGCG ACGGAAGACG AAGACGTGAA GCTCGCTATC
TTCTCGACGA GTCCCGAAAT CCGAAACTAT CGGGCAAACA TGCTGACCGA GGTCATCGGT
ACGTTCGTGC TGGTCTTCGG GGTGTTGTAT CTGAACTCCG CCGGATTCTT GGACGGCGCT
TCCGGTGAGT TCCTCCGAAC GATCACGATC GACGGTCAAG AGGTCGGATT CGGTCTCGGC
GCGCTGTCAG CGCTTCCGGT CGCACTGGTC GTGCTCGGAA TCGGGCTCTC TCTGGGTGGC
CCGACCGGCT ATGCGATCAA TCCTGCACGC GACTTCGGAC CGCGTATCGC ACACGCGGTC
CTCCCGTTTC CACACAAGGG CTCGTCGGAC TGGGCGTATT CTTGGGTGCC TATCGTCGGT
CCGATCATCG GAGCGCTCCT CGCGGCCGGG CTGTATCACG CACTGTAA
 
Protein sequence
MNPYIAEAIG TAILIIFGGG VVANVVLNET KGHESGWIVI TWGWAIGVFM GVFTISQVSG 
GHINPAVTIG LAAAGLFDWA QVPIYIAAQT LGAFLGGVVV WLAYKDHFAA TEDEDVKLAI
FSTSPEIRNY RANMLTEVIG TFVLVFGVLY LNSAGFLDGA SGEFLRTITI DGQEVGFGLG
ALSALPVALV VLGIGLSLGG PTGYAINPAR DFGPRIAHAV LPFPHKGSSD WAYSWVPIVG
PIIGALLAAG LYHAL