Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2513 |
Symbol | |
ID | 8412057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2412707 |
End bp | 2413474 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645020854 |
Product | MIP family channel protein |
Protein accession | YP_003178328 |
Protein GI | 257388555 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCGT ACATCGCGGA AGCCATCGGT ACTGCGATCC TCATCATCTT CGGTGGCGGT GTCGTCGCTA ACGTCGTCCT CAACGAGACG AAAGGGCACG AAAGCGGTTG GATCGTCATC ACGTGGGGAT GGGCTATCGG TGTGTTCATG GGCGTGTTCA CGATCAGTCA GGTCAGCGGC GGTCACATCA ATCCCGCCGT GACGATCGGA CTGGCTGCGG CCGGATTGTT CGACTGGGCA CAGGTCCCGA TCTACATCGC CGCTCAAACG CTCGGGGCGT TCCTGGGTGG TGTGGTGGTC TGGCTGGCGT ACAAGGATCA CTTTGCCGCG ACGGAAGACG AAGACGTGAA GCTCGCTATC TTCTCGACGA GTCCCGAAAT CCGAAACTAT CGGGCAAACA TGCTGACCGA GGTCATCGGT ACGTTCGTGC TGGTCTTCGG GGTGTTGTAT CTGAACTCCG CCGGATTCTT GGACGGCGCT TCCGGTGAGT TCCTCCGAAC GATCACGATC GACGGTCAAG AGGTCGGATT CGGTCTCGGC GCGCTGTCAG CGCTTCCGGT CGCACTGGTC GTGCTCGGAA TCGGGCTCTC TCTGGGTGGC CCGACCGGCT ATGCGATCAA TCCTGCACGC GACTTCGGAC CGCGTATCGC ACACGCGGTC CTCCCGTTTC CACACAAGGG CTCGTCGGAC TGGGCGTATT CTTGGGTGCC TATCGTCGGT CCGATCATCG GAGCGCTCCT CGCGGCCGGG CTGTATCACG CACTGTAA
|
Protein sequence | MNPYIAEAIG TAILIIFGGG VVANVVLNET KGHESGWIVI TWGWAIGVFM GVFTISQVSG GHINPAVTIG LAAAGLFDWA QVPIYIAAQT LGAFLGGVVV WLAYKDHFAA TEDEDVKLAI FSTSPEIRNY RANMLTEVIG TFVLVFGVLY LNSAGFLDGA SGEFLRTITI DGQEVGFGLG ALSALPVALV VLGIGLSLGG PTGYAINPAR DFGPRIAHAV LPFPHKGSSD WAYSWVPIVG PIIGALLAAG LYHAL
|
| |