| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2354 |
|---|
| Symbol | |
|---|
| ID | 8411895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2266212 |
|---|
| End bp | 2267120 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020697 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003178173 |
|---|
| Protein GI | 257388400 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.165015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC GCCGAGAGAC GTTTCTGTTC GTCCTGCTGG CGATGCTCTG GGGGACCTCC
TTCGTCGCGA TCAAGGCGGG GCTCGAAGAC CTGCCGCCGG TGTTGTTCGC GGCGGTTCGC
TACGATCTCG CGGGCGTCCT CATGCTCGCC TACGCGGCCG CCACGACCGA CGACTGGCTG
CCACGCTCCC GAGCGGACTG GATCGCCGTC GCGATCAGCG CCACGCTCGT GATCGCACTA
TATAACGCCT TCCTGTTCGT CGGCGAGCGG GACGTGACCA GCGCAGTCGC GGCAATTCTG
ATCGCGACGA ATCCGATCCT CGCGACGGCA TTCTCGCGGG CGCTACTCCC GGACGAGCGC
CTGTCGACTG TCGGAACTGT GGGACTGCTA CTGGGCTTTG TCGGCGTCGG ACTGGTCACG
CGTCCGGACG TGACCGGCGG CCTCAGCGCC GAACTCGTCG CGTCCGGATT CGTCCTGCTG
GCCGCGCTGT CGATCGCTCT CGGGAGCGTC CTGCTCCAGC GGGTCGACAG CGGGCTCGGG
ACGGAGGGAC TCGTCGCCTG GTCGAACGGC GTCGGTGCCG TCCTCCTACA CGCTATCAGC
GGCGCGCTCC CGAACGAGTC CCTGGGGGGA CTGACCCTGA CGGCGGAGTC GGTCGTCGCG
ATCGTCTACC TCGCCGTGTT CGCCAGCGTG ATCGGCTACT TCGTCTACTT TCGCCTGCTC
GGACGGCTCG GTGCGATCCA GATCAACCTC GTCTCGTACG CGACGCCGGT GTTTGCCGCG
GTCACGGGCT GGCTCCTGCT CGAAGAGACG ATCGACGCCA CGACCGTGAC CGGCTTCCTC
GTCGTCCTCG TCGGCTTCCT GCTCCTGAAG CGGGACGCGA TCCGCGAGGA ACTGACCGCG
CTTCGATGA
|
|---|
| Protein sequence | MSTRRETFLF VLLAMLWGTS FVAIKAGLED LPPVLFAAVR YDLAGVLMLA YAAATTDDWL
PRSRADWIAV AISATLVIAL YNAFLFVGER DVTSAVAAIL IATNPILATA FSRALLPDER
LSTVGTVGLL LGFVGVGLVT RPDVTGGLSA ELVASGFVLL AALSIALGSV LLQRVDSGLG
TEGLVAWSNG VGAVLLHAIS GALPNESLGG LTLTAESVVA IVYLAVFASV IGYFVYFRLL
GRLGAIQINL VSYATPVFAA VTGWLLLEET IDATTVTGFL VVLVGFLLLK RDAIREELTA
LR
|
|---|
| |