Gene Hmuk_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2160 
Symbol 
ID8411699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2073091 
End bp2074992 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content65% 
IMG OID645020502 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_003177980 
Protein GI257388207 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.293504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA ATGAACTAAT CTGGCGAATC GCTGGCGGTT CCGGTGACGG GATCGACTCG 
ACGAGCCAAA ACTTCGCAAA GGCCCTGATG CGCTCGGGAC TTGACGTTTT CACGCATCGT
CACTATCCCT CGCGCATCCG AGGCGGCCAC ACGTTCGTAG AGGTACGCGC AGGCGACGAA
GACGTACGCT CGCGCGGTGA CGGCTACAAC TTCCTCCTCG CCCTCGGTGA CTCCTTCGCA
CGGAACCCAC AGGACGAAGC CTACTACGGC GACGAGGAAG TCAAGCCGCT CTCGGAGAAC
CTCCACGATC TCCGGGAGGG TGGCGTCATC GTCTACGACG AGGGACTCCT CGACGAGGAC
GCCATCGCCG AGCTGAACCT CGAAGCGCGT GCCGAGGAGA ACGACTGGCA CGTCTACCCG
ATGAACCTCC GCGAGATGGC CCGCGAACAC GGTCGCGAGG TCATGCGCAA CACCGCTGGC
GTCGCCGTCA CGGCGGCGCT GCTGGATACG GACCCGGCCT TCTTCGAGGA GCTCATGCGA
GAGAACATGT CGGGCGACAT CCTCGAAGAC AACCTCGCGG TGCTCGAAGA CGCCTACGAG
CGAGCCGAGG AACTCGAACA CACCCACGAT ATCACGATGC CGGAAGCGGA AGACCACGAC
GACGAGCAGG TCCTCCTCTC CGGATCGAAC GCTATCGCCT ACGGTGCCCT CGACGAGGGC
TGTCGCTTCA TCGCTGGCTA CCCCATGACG CCGTGGACCG ACGTGTTCAC GATCATGTCC
CAGCACCTGC CGAAGTTCGG CGGGATCTCC GAGCAGGTCG AAGACGAGAT CGCCGCGGCG
GCGCTGGCAC TCGGTGCCAG CCACGCTGGC GTCAAGTCGA TGTCCGGCTC CTCGGGCGGT
GGCTTCGCAC TGATGTCCGA ACCGCTCGGT CTCGCCGAGA TGACCGAGAC GCCGGTCGTG
CTCGTCGAAG CGATGCGCGC CGGCCCCTCG ACCGGGATGC CGACCAAGCC CGAGCAGGCC
GACCTCGAAC ACGTCCTGTA CACGAGTCAG GGCGACTCGG CTCGCGTCGT CTTCGCACCC
GCCAACATCC GGGAGTGCTA CGACCAGACG CGAGCGGCCT TCCGGATCGC CTACGAGTAC
CAGATCCCGT CGATCGTGAT CTACGACCAG AAGCTCCAGG GCGAGCTTCG CAACGTCGAC
GAGAGCTTCT TCGACCGCGA GCCAAACGCC GACCCCGGCT CCGTGCTCAC CGAAGAGGAG
ATCGCCGACG CGGCCCACCA CGCGTCGGGC AAGTTCCAGC GCTTCCAGCA CGAACCGGAG
GACGGCTCCA ACGTGAGCCC GCGCTCGGTG CCCGGCCAGA AGGACGGCCG CTACCTCGCG
ACCGGCAACG AACACAACCC GTCGGGCCAC ATCAGCGAGG ACCCCGACAA CCGGATCGCA
CAGATGAACC GTCGGCTGGA CAAGCTCGAC GACATCCGTG CTGACTTAGA CGAGAACACG
TCCCACCAGA CCTACCACGG TCCGGAGGAC GCCGACTACG GCATCCTCGT GTGGGGCAGC
CACCAGGACA CCGTCTTCGA GGCCGTCGAC CGTCTCAACG ACGGCGGCCA CTCCGTGAAG
GCACTCGGCG TCTCCGATAT GGCACCCTAC CCCGTCGAAG AGGTCTCGGC GTGGCTCGAA
TCCGTCGACG AGGCGCTCGT CGTCGAGATG AACGCCAGCG CACAGTTCCG CGGCCTCACG
CAGAAGGAGA TCGGCCGCTT CGGTCCGAAA CTCTCCAGTC TGCTGAAGTA CAACGGGAAC
CCGTTCGAAC CGGCGGAGAT CGTCGAGGGC TTCGAGACCA GCATCAACGG CGAGGATCTC
GCCGCGAGCA ACATGAAGTA CCTCCCAGCG GCAGGTGACT AA
 
Protein sequence
MTDNELIWRI AGGSGDGIDS TSQNFAKALM RSGLDVFTHR HYPSRIRGGH TFVEVRAGDE 
DVRSRGDGYN FLLALGDSFA RNPQDEAYYG DEEVKPLSEN LHDLREGGVI VYDEGLLDED
AIAELNLEAR AEENDWHVYP MNLREMAREH GREVMRNTAG VAVTAALLDT DPAFFEELMR
ENMSGDILED NLAVLEDAYE RAEELEHTHD ITMPEAEDHD DEQVLLSGSN AIAYGALDEG
CRFIAGYPMT PWTDVFTIMS QHLPKFGGIS EQVEDEIAAA ALALGASHAG VKSMSGSSGG
GFALMSEPLG LAEMTETPVV LVEAMRAGPS TGMPTKPEQA DLEHVLYTSQ GDSARVVFAP
ANIRECYDQT RAAFRIAYEY QIPSIVIYDQ KLQGELRNVD ESFFDREPNA DPGSVLTEEE
IADAAHHASG KFQRFQHEPE DGSNVSPRSV PGQKDGRYLA TGNEHNPSGH ISEDPDNRIA
QMNRRLDKLD DIRADLDENT SHQTYHGPED ADYGILVWGS HQDTVFEAVD RLNDGGHSVK
ALGVSDMAPY PVEEVSAWLE SVDEALVVEM NASAQFRGLT QKEIGRFGPK LSSLLKYNGN
PFEPAEIVEG FETSINGEDL AASNMKYLPA AGD