Gene Hmuk_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2006 
Symbol 
ID8411537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1908087 
End bp1909292 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content57% 
IMG OID645020340 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003177826 
Protein GI257388053 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0414865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG GGTACCTGAT CGATACACCA GCGCCGGGGA AGTACCTGTC CGCCGATTCG 
ACAGCATCAC TTCCCGCATC GAAATTCTAT CTCCCAGACG ATCTTCCACC GTCGTTGGAA
CTCTCTGCCG AGGTCATCGA GGCACACGGG CGAGCGATGC ATTCACTCGG TCGCCTCGAC
GGTTTCTGGA GTAAGGTCGA CGACCCAGAG ACTGCCTTTG GCCTGTTTGT GTACAAGGAG
GCAGAACAGT CCTCGCAGGT CGAAGGGACG CAGGTGACCG TCTCAGATAT GCTTCAGAGA
GGGAGCGATT CGAAGGACGT ACGAGAAGCT CGGAACTACG CTACGGCGCT CCGGGATGCA
ACTGAGACGC TGATCAATCA GGGTCGGAGT CGACAGCAGC TCTCGCTCGC TCTCCTGCAA
TCACTGCACG AGTCGCTGAT GGAAACCGGA CGAACGGACG ACGAGGATCC ACGACCGGGC
GAGTTCCGGG ATCGATACGT CTGGATCGAG GAAGAGCAAC AGCGTGGCTA CGGTACCGCT
GTCCGATTCG CTCCCCCGAA ACCGGAGATC GCTGTGTCGA AGATGGACAA TTTCGAGGAG
TACATGCAGC ACGGAGGGTA CCCGACGCTC GTCGATATCG GGCTGCTCCA TTACCAGCTC
GAAACGGTTC ATCCGTTCGT CGACGGCAAC GGTCGTGTCG GGCGGCTGTT GATCGTCCTG
ATGCTGATCG CTGACGACAT TCTCGTCCAC CCGCTGTTCT ACCTCAGTTC CTATATTCGT
CGTAATCGCG ACGAGTACAC GGATCGCTTG CTCGCAGTCA ACGAGGAGGG AGAGTGGAAT
GCCTGGCTCG AATTCTTTTT GATCGGAATT CGAGAACAGG CAGACGAAGC CTTTACTCGC
GCGAAATTAC TGCTTCAGTT GCGGGAGGGA TATCGTCAGG AATACAGTGA CGCCGCTCCC
TCGGTCCAGG CCCTGATCGA AGCTCTGTTC ACCGAACCTA TCTTCACCGT CTCTCGGGCA
GCCGAACTGA TCGATATGTC GTACCAGGCA GCGAACAAAG CAGTCGACCG ACTCGAAGCA
GACGGTGTCG TCGAGGAACT CACTGGTCAA GAACGATATC GTCAGTTTCA GGCGAACGAA
GTACTCGGGG TTCTGAACAG AAGTCAGGCT GAGATTCCCG CTCCCGGTGA ACTAATAGCT
GAGTAA
 
Protein sequence
MKDGYLIDTP APGKYLSADS TASLPASKFY LPDDLPPSLE LSAEVIEAHG RAMHSLGRLD 
GFWSKVDDPE TAFGLFVYKE AEQSSQVEGT QVTVSDMLQR GSDSKDVREA RNYATALRDA
TETLINQGRS RQQLSLALLQ SLHESLMETG RTDDEDPRPG EFRDRYVWIE EEQQRGYGTA
VRFAPPKPEI AVSKMDNFEE YMQHGGYPTL VDIGLLHYQL ETVHPFVDGN GRVGRLLIVL
MLIADDILVH PLFYLSSYIR RNRDEYTDRL LAVNEEGEWN AWLEFFLIGI REQADEAFTR
AKLLLQLREG YRQEYSDAAP SVQALIEALF TEPIFTVSRA AELIDMSYQA ANKAVDRLEA
DGVVEELTGQ ERYRQFQANE VLGVLNRSQA EIPAPGELIA E