Gene Hmuk_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1991 
Symbol 
ID8411520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1895409 
End bp1896377 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID645020323 
ProductTranscription factor TFIIB cyclin-related 
Protein accessionYP_003177811 
Protein GI257388038 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.204428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCACCATCCG ACGATTTACG GACGAGACCG AGCACACAGA GGAGACCGAG 
GACGAATCAG AGCACGTCTG TCCAGAGTGT GGGGGCGATC TGGTCGCCGA CAGCGAACGC
GGCGAGACCG TCTGTGAAGA CTGCGGACTG GTCGTCGAGG AAGACGAGAT CGACCCCGGT
CCCGAGTGGC GCGCGTTCGA CGCCAGCGAG AAAGACGAGA AGTCCCGCGT CGGCGCACCG
ACGACCAACA TGATGCACGA CAAGGGACTG TCGACCAACA TCGGCTGGCA GGACAAGGAC
GCCTACGGCA ACTCCCTGTC CTCGCGCCAG CGCGAGAAGA TGCAGCGCCT GCGTACCTGG
AACGAGCGAT TCCGGACACG CGACTCCAAG GAGCGCAACC TCAAGCAGGC GCTTGGCGAG
ATCGACCGCA TGGCCTCGGC GCTGGGCCTG CCCGAGAACG TCCGCGAAAC CGCCAGCGTC
ATCTATCGCC GCGCGCTCGA CGAGGACCTG CTGCCCGGCC GCTCCATCGA GGGCGTCGCC
ACCTCGTCGC TGTACGCCGC CGCTCGTCAG GCCGGCACGC CGCGCTCGCT CGACGAGATC
AGCGCCGTCT CTCGCGTCGA GAAAGACGAG ATCGCCCGGA CCTATCGCTA CGTCGTCCGC
GAGCTCGGCC TGGAGATCCA GCCGGCAGAT CCCGAGAGCT ACGTCCCTCG CTTTGCCTCC
GATCTCGACC TCTCGGACGA AGTCGAACGC CGGGCTCGCC AGCTGCTCCA GAACGCCAAA
CAGCAGGGCG TTCACTCCGG CAAGTCCCCG GTCGGCCTCG CGGCGGCCGG CGTGTACGCC
GCGTCGCTGC TGACCAACGA GAAGGTCACC CAGAGCGAGG TCAGCGAAGT CGCGAACATC
TCCGAGGTCA CGATCCGCAA CCGCTACCAC GAGCTGCTGG AAGCCGAAGA GGAAGTCCAA
CAGCTCTGA
 
Protein sequence
MTDTTIRRFT DETEHTEETE DESEHVCPEC GGDLVADSER GETVCEDCGL VVEEDEIDPG 
PEWRAFDASE KDEKSRVGAP TTNMMHDKGL STNIGWQDKD AYGNSLSSRQ REKMQRLRTW
NERFRTRDSK ERNLKQALGE IDRMASALGL PENVRETASV IYRRALDEDL LPGRSIEGVA
TSSLYAAARQ AGTPRSLDEI SAVSRVEKDE IARTYRYVVR ELGLEIQPAD PESYVPRFAS
DLDLSDEVER RARQLLQNAK QQGVHSGKSP VGLAAAGVYA ASLLTNEKVT QSEVSEVANI
SEVTIRNRYH ELLEAEEEVQ QL