Gene Hmuk_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1934 
Symbol 
ID8411462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1842189 
End bp1843886 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content70% 
IMG OID645020265 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177754 
Protein GI257387981 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC GGGTCGACAG ACTCGCGCTG CCCGTCGGTA CCGTCGCGAC GCTGGCGACG 
CTGCTGGTCG TGTTCTACTA CCCCGTCGGG AGCGTCCTCG TCGGCGCGGT TCGTGTCGGC
GGACAGCTCT CGCTGGCACC GCTGAAGGCC GTCCTCGGCG ACCCGTTCTA CGCGGATCTG
TTCGGCTTTA CCGCGTACCA GGCGCTGCTG TCGACGGTCG CCAGCGTCCT CGTCGGACTG
CCGGGCGCGT ACCTGCTGGC TCGCTTCGAG TTTCCCGGCC GGCGCTTCCT GCGCTCGGTG
ACGATTCTTC CCTTCGTCTT GCCGTCGATC ATGGTCGCGG TGGGCTTTCT GGCGATGTTC
GGCCGCACCG GGCTGTTCAA CGACCTGCTC GCCGTCGTCG GGCTCGGCCC GGTCGAACTC
ACCTTCACGC TGGAGATCAT CGTACTGGCC CACGCCTTCT ACAACGCGCC GCTGGTGACG
CGACTGGTGA CGGCCGCCTG GGAGTCCGTC GACGCGCGAC GCGTCGAGAC CGCCCGGACG
CTGGGTGCGT CACCGCTCGT GGCGTTTCGC GACGTGGTCG CCCCGCAGTT GCTCCCGGCG
CTGTTGACCG CCGCGGTGCT CACCTTCCTC TTTACGTTCA TGTCGTTCCC CATCGTGCTG
GCGCTGGGCG GGCTCGAATT CGCGACCGTC GAGGTGTGGC TGTTCGCCCG CGTTCGGGAC
CTCGCGCTGA CCGAGGCGGC GACGCTCGGA GCCATCGAAA CGGCGCTGTC GCTGGGACTG
ATCTACGTCT ACCTCCGGTT CGAGGCGATG CAACTTCGTG CCGGCGGCGG CTCTCGTTCG
ATCGACCGAG TGCCGCTGTT GGCCGGCTGG CGGTCGCTGA CCGATCCGCG CCGACTCGCG
CTCCTGTGTT ACGGCGGCGT CGTTCTGGTC CTGTTCGTCG GGCCGCTGGC GAGCCTGGTC
GTCGAGAGCG TCACGACGCC CGAGGGACAG CTCACGACCG ACTACTACGC CTTCCTGCTG
GCCCAGCAGG CTTCGGCCGC CACGGGGACG GTTCAGCCCG TGCCGGCGAT CACGAACTCG
CTGCTGTTTG CGGCCGGCGC GCTCGTGCTC GCTCTCCCGA TGGGCGTCGT CGTCTCGGTG
GTCGCCGCCC GCGAGACGCG GGGCTCGCGG GTCGCCGAGG CGCTGCTGAC GGCACCGCTC
GCGGTCAGCG GGATCGTCCT CGGTCTGGGG ATGCTCCGGA CGCTCGTGTT CGGGACGGAG
CTGTTCGGCC ACCGGCTGAC GGTCACCGGT CCGGTCGCGA TCGTCGCCGC CCACGCCGTC
GCGGGCTACC CCTTCGTCAC CCGGACGGTG ACGCCGGCAC TGAGTGCCAT CGACGACCGA
CTCGTCGACG CCGCCCGCTC GCTGGGCGCG AGCCGGACGA CGGCTCTCCT CGACGTGGAA
CTGCCGCTGA CCGCCGCCGC GCTCGTGGCC GGGGCGGCCT TCGCCGTCGC CATCAGCATC
GGCGAGTTCG ACACGACGGT GTTGCTCGCC GAGGGCGTCG ACAGCGCGAC GATGCCGGTG
GCGCTGGAAC GGTACACCGG GAACCGATCG CTGGGGCCGA ACCTCGGACC GGCGACGGCG
ATGGGGACGG TGTTGCTCGC GGTGACGACC GTCAGCTTCG TGGTGATCGA TCGCGTGGGC
GGGCGGTGGG AACGATGA
 
Protein sequence
MDARVDRLAL PVGTVATLAT LLVVFYYPVG SVLVGAVRVG GQLSLAPLKA VLGDPFYADL 
FGFTAYQALL STVASVLVGL PGAYLLARFE FPGRRFLRSV TILPFVLPSI MVAVGFLAMF
GRTGLFNDLL AVVGLGPVEL TFTLEIIVLA HAFYNAPLVT RLVTAAWESV DARRVETART
LGASPLVAFR DVVAPQLLPA LLTAAVLTFL FTFMSFPIVL ALGGLEFATV EVWLFARVRD
LALTEAATLG AIETALSLGL IYVYLRFEAM QLRAGGGSRS IDRVPLLAGW RSLTDPRRLA
LLCYGGVVLV LFVGPLASLV VESVTTPEGQ LTTDYYAFLL AQQASAATGT VQPVPAITNS
LLFAAGALVL ALPMGVVVSV VAARETRGSR VAEALLTAPL AVSGIVLGLG MLRTLVFGTE
LFGHRLTVTG PVAIVAAHAV AGYPFVTRTV TPALSAIDDR LVDAARSLGA SRTTALLDVE
LPLTAAALVA GAAFAVAISI GEFDTTVLLA EGVDSATMPV ALERYTGNRS LGPNLGPATA
MGTVLLAVTT VSFVVIDRVG GRWER