Gene Hmuk_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1926 
Symbol 
ID8411453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1834364 
End bp1835932 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content64% 
IMG OID645020256 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_003177746 
Protein GI257387973 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.676502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG TCGCCGCACT ACTTGCCGTC ACGCTACTCG GTGCCATCGC GACCTTCCTG 
GTCGACGACC GCTACGCGGC GAAGTTCGCG ACCGCTGTGA GCACGATCCC GCTCGTCGGC
TCGGTGTGGA TGTACTACGT CTACCTCACC GAGTACCAGG GCGTCGGGAA CGCCTTGCTC
TCGCCCGACA CGGTCGCTTT CAGACAGACG ATCGACTGGA TCGAGCTGGG CGGTTACACG
ATCCAGTACT CCGTCGGACT GGACGGCGTG AGCATGCCGC TGCTGGCGCT GACCGGCATC
CTGACGACGC TCGCACTCGT GAGTTCCTGG ACGCCGATCG ACGAACGTCA GTCGCAGTTC
TACGGACTGA TGCTCCTGAT GGAGGTCAGT CTCATCGGCG TCTTCTCGGC GCTGGACTTC
TTCTTCTGGT TCGTCTTCTG GGAGGGCGTC CTCATCCCGA TGTACCTGCT GATCGGGGTC
TGGGGCGGCC CGCGCCGGAA GTACGCCGCG ATCAAGTTCT TCGTCTACAC GAACGTGGCC
TCGCTGGTCA TGTTCGTGGG CTTTTTCGCG CTGGTGTTCT CGCTGGGCGA CTCCATCGCG
ACGCTCGGCC TGCCGGAGAT CACGCAGGCC CTCGTCGCCG GTGAGATGGG GTCGCTCGCC
GGTATCGCCG TCGCCGACCT GAAGCTGCTG GCGTTCGTCC TGATGTTCGT CGGCTTCGCG
GTGAAGGTGC CGGTCTTCCC GCTGCACACG TGGCTGCCAG ACGCTCACGT CGAGGCTCCG
ACGCCGGTGT CGGTGATGCT GGCCGGCGTC CTCCTGAAGA TGGGGACCTA CGCGCTCTTG
CGGTTCAACT TCACCATGCT GTCGGACGTG GCGACGGGTT CGGTCCTCGC GATCATGCCG
GTCGCGATCG CGGTGATCGG CGTGTTCAGC GTCATCTACG GCGCGTTGCT CGCACTCGCA
CAGCGCGACC TCAAGCGCAT CGTCGCGTAC TCCTCGATCT CGTCGATGGG ATACGTCATC
CTCGGGCTGG TCGCGTTCAC GCCACACGGC ATGGGCGGGG CGACCTTCCA GATGATCTCC
CACGGCCTGA TTTCCGGGCT GATGTTCATG GCCGTCGGCG TCATCTACAA CGAGACGCAC
ACGCGCATGG TCGGCGATAT GTCCGGCCTG GCGGATCGGA TGCCCTGGAC GGTCGGCATC
TTCGTCTCGG CGGCCTTCGG GTATATGGGG CTGCCCCTGA TGAGCGGGTT CGCCGCCGAA
GTGTTCATCT TCCTGGGCTC GTTCGGTGCG ACCGACACGC TGGGAACGCT CGCGCCGGTG
CTGACTTCGA TCGCGATGTT CGGCATCGTC ATCGTCGCCG GCTACCTCCT GTGGGCGATG
CAGCGGACCC TCTTCGGTGG CTACGAGCTC GAAACCGACT ACGAGCTCGA CGGTGCGGCG
TTCCACGACG TGGCTCCGCT GGCAGTCCTG CTCTTGCTGG TCATCCTGCT CGGGGTCGCG
CCCGACCTCT CGTACGGGAT GATCCAGGAA GCGGTTAATC CGATCCTCGA CATCGGAGGT
GGTGTCTAA
 
Protein sequence
MVAVAALLAV TLLGAIATFL VDDRYAAKFA TAVSTIPLVG SVWMYYVYLT EYQGVGNALL 
SPDTVAFRQT IDWIELGGYT IQYSVGLDGV SMPLLALTGI LTTLALVSSW TPIDERQSQF
YGLMLLMEVS LIGVFSALDF FFWFVFWEGV LIPMYLLIGV WGGPRRKYAA IKFFVYTNVA
SLVMFVGFFA LVFSLGDSIA TLGLPEITQA LVAGEMGSLA GIAVADLKLL AFVLMFVGFA
VKVPVFPLHT WLPDAHVEAP TPVSVMLAGV LLKMGTYALL RFNFTMLSDV ATGSVLAIMP
VAIAVIGVFS VIYGALLALA QRDLKRIVAY SSISSMGYVI LGLVAFTPHG MGGATFQMIS
HGLISGLMFM AVGVIYNETH TRMVGDMSGL ADRMPWTVGI FVSAAFGYMG LPLMSGFAAE
VFIFLGSFGA TDTLGTLAPV LTSIAMFGIV IVAGYLLWAM QRTLFGGYEL ETDYELDGAA
FHDVAPLAVL LLLVILLGVA PDLSYGMIQE AVNPILDIGG GV