| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1829 |
|---|
| Symbol | |
|---|
| ID | 8411356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1748739 |
|---|
| End bp | 1749482 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645020160 |
|---|
| Product | ribosomal protein L4/L1e |
|---|
| Protein accession | YP_003177650 |
|---|
| Protein GI | 257387877 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.704715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAA CAATCTACGA CCTGGACGGT AACGCAGGCG ACGAGGTCGA TCTGCCCGCG
GTCTTCGAGA CCACGGTCCG ACCCGATCTC ATCGCCACTG CAGTGCGTGC CCAACAGGCA
AACCGGAAGC AGGACTACGG GTCCGACGAG TACGCGGGTC TGCGAACGCC TGCCGAGTCG
TTCGGTAGCG GTCGCGGGAT GGCCCACGTT CCCCGAGAGG GAGGCCAGGC ACGGCGCGTC
CCCCAGGCAG TTGGGGGTCG ACCGGCCCAC CCGCCGAAGG CCGAGAAGGA CCGATCGCTG
ACGATCAACG ACAAGGAGCG CAAGCTCGCG ACGCGCTCGG CCATCGCCGC GACGGCCGAC
AGCGAACTCG TCGCCGAGCG CGGTCACGAG TTCGACGACG ATCTCGAACT CCCGCTCGTC
GTCGACGACT CCTTCGAGGA CCTCCAGAAG ACCCAGGCCG TCGTCGACAC GCTCGAATCG
CTCGGCGTTC ACGCCGACAT CGAGCGCGCC GACGACACGA AGATCAAGGC CGGCAAGGGC
TCCGCCCGCG GGCGGAAGTA CCGCCGACCG TCCTCGATTC TGTTCGTCAC CAGCGAGGAG
CCGTCGAAGG CGGCTCGCAA CCTCGCCGGT GCCGACGTGA CCACCGCGCG CGAGGTCAAC
GCAGAGGACC TCGCACCGGG GACTGCCCCC GGTCGGCTCA CGATCTGGAC CGAGAGCGCG
CTCGCGGAGG TGTCCGAGCG ATGA
|
|---|
| Protein sequence | MQATIYDLDG NAGDEVDLPA VFETTVRPDL IATAVRAQQA NRKQDYGSDE YAGLRTPAES
FGSGRGMAHV PREGGQARRV PQAVGGRPAH PPKAEKDRSL TINDKERKLA TRSAIAATAD
SELVAERGHE FDDDLELPLV VDDSFEDLQK TQAVVDTLES LGVHADIERA DDTKIKAGKG
SARGRKYRRP SSILFVTSEE PSKAARNLAG ADVTTAREVN AEDLAPGTAP GRLTIWTESA
LAEVSER
|
|---|
| |