| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1828 |
|---|
| Symbol | rpl3p |
|---|
| ID | 8411355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1747719 |
|---|
| End bp | 1748735 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645020159 |
|---|
| Product | 50S ribosomal protein L3P |
|---|
| Protein accession | YP_003177649 |
|---|
| Protein GI | 257387876 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.752407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAC CAAGCAGACC ACGCAAAGGC TCGCTGGGCT ACGGCCCGCG TACGCGAGCG
GCGAACGAAA CGCCGCGCTT CAACAGCTGG CCGTCCGACG ACGGCCAGGC TGGTCTCCAG
GGGTTCGCCG GCTACAAGGC GGGAATGACA CACGTCACTC TCGTCAACGA CGAACCCAAC
TCCCCACGCG AGGGGATGGA AGAGACCGTC CCGGTGACGG TCGTGGAGAC GCCGCCAGTG
CGCGCCGTGG CAGTCCGAGC CTACGAAGAC ACGCCGTACG GCAAGCGTCC GCTCACGGAG
GTCTGGACCG ACGAGTTCCA CTCGGAACTC GATCGCGCTC TGGACCTTCC CGAGGGCCAC
GACGCCGATG CCGCAGAGGA ACAGGTACGC GACGCACTCG ACGCCGGTGA CATCGCGGAC
GTGCGCGTCG TCACGCACAC GGTCCCCGAC GAACTGGCCA ACGTGCCAAA GAAAAAGCCC
GACGTGATGG AGACGCGAGT CGGCGGTGGC TCGCTGAGCG ACCGATTCGA GCACGCGCTC
GAACTGGTCG ACGACGGCGG CGAACACGCC ATGAACGACG TGTTCCGCGC CGGTGAGTAC
GCCGACATCG CGGCCGTCAC CAAGGGGAAA GGCACCCAGG GCCCCGTCAA GCGATGGGGC
GTCCAGAAGC GGAAGGGCAA GCACGCCCGC CAGGGCTGGC GACGACGGAT CGGCAACCTC
GGTCCGTGGA ACCCCTCCCG GGTCCGCTCG ACGGTGCCCC AGCAGGGCCA GACCGGCTAC
CACCAGCGAA CCGAGCTCAA CAAGCGCCTC ATCGATATCG GCGACGGCGA CGACGCCAGC
GTCGACGGCG GCTTCGTCAA CTACGGCGAA GTCGACGGGC CGTACACGCT CGTCAAGGGC
TCGGTTCCCG GTCCGGACCA GCGCCTCGTG CGCTTCCGAC CGGCAGTGCG TCCGAACGAC
CAGCCGCGCC TCGACCCAGA GGTGCGCTTC GTCTCGACGC AGTCGAATCA GGGATAA
|
|---|
| Protein sequence | MPQPSRPRKG SLGYGPRTRA ANETPRFNSW PSDDGQAGLQ GFAGYKAGMT HVTLVNDEPN
SPREGMEETV PVTVVETPPV RAVAVRAYED TPYGKRPLTE VWTDEFHSEL DRALDLPEGH
DADAAEEQVR DALDAGDIAD VRVVTHTVPD ELANVPKKKP DVMETRVGGG SLSDRFEHAL
ELVDDGGEHA MNDVFRAGEY ADIAAVTKGK GTQGPVKRWG VQKRKGKHAR QGWRRRIGNL
GPWNPSRVRS TVPQQGQTGY HQRTELNKRL IDIGDGDDAS VDGGFVNYGE VDGPYTLVKG
SVPGPDQRLV RFRPAVRPND QPRLDPEVRF VSTQSNQG
|
|---|
| |