Gene Hmuk_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1809 
Symbol 
ID8411335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1730441 
End bp1731118 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID645020139 
ProductSPP-like hydrolase 
Protein accessionYP_003177630 
Protein GI257387857 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01482] Sucrose-phosphate phosphatase subfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.752467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.527936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGA CACCGCCGCT GGTCGTCGAC GTCGACGGAA CGCTGACCGG ACCGGACCAG 
GCAGTCGCGC CCCGTGCGAT GACGGTCCTC GCGGAGTGGC CGGCTCCGGT GGTCGTGGCC
ACGGGCAAGG CGTTCCCGTT CCCGGTCGCG CTCTGTCAGT TCGTCGGCAT CGAGCCGTGC
GTGATCGCGG AGAACGGTGG CGTCGTCTTC GTCGGCGAGA GCGACGAACT GGTGTTCGGC
GGTGATCCGG AGGCCGTCGA CGCCTTCGTC GCGGCGTATC GCGAGCGGGG ACACTCGCTC
GGCTGGGGGA ACGTGGACCT GGCGAACCGC TGGCGCGAGA CGGAGATCGC CGTCTCGCTG
GACCAGCCCC GCGAACCGTT AGACGAGCTG GCCGAGACCC ACGGTCTGAC CGTCATCGAC
ACGGGCTACG CCTACCACGT CAAGTCCCCG GGCGTCGACA AGGGGACGGG GCTGCGGGCG
GTCGCCGAGG AACTCGGGTA CGCACCCGGT GACTTTCTCG CGGTCGGCGA CTCGATCAAC
GACGTCGCAA CGTTCGAACT GGCCGGCGAG AGCGTCGCCG TCGCCAACGC GGACGAACAC
GCGGCCGCGG CGGCCGACCG CCGGACCGAC GCCCGGTACG CCGCGGGGTT CCTCGAAGCG
GTCGAACCGT ATCGGTGA
 
Protein sequence
MQETPPLVVD VDGTLTGPDQ AVAPRAMTVL AEWPAPVVVA TGKAFPFPVA LCQFVGIEPC 
VIAENGGVVF VGESDELVFG GDPEAVDAFV AAYRERGHSL GWGNVDLANR WRETEIAVSL
DQPREPLDEL AETHGLTVID TGYAYHVKSP GVDKGTGLRA VAEELGYAPG DFLAVGDSIN
DVATFELAGE SVAVANADEH AAAAADRRTD ARYAAGFLEA VEPYR