Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1809 |
Symbol | |
ID | 8411335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1730441 |
End bp | 1731118 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645020139 |
Product | SPP-like hydrolase |
Protein accession | YP_003177630 |
Protein GI | 257387857 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01482] Sucrose-phosphate phosphatase subfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.752467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.527936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAGA CACCGCCGCT GGTCGTCGAC GTCGACGGAA CGCTGACCGG ACCGGACCAG GCAGTCGCGC CCCGTGCGAT GACGGTCCTC GCGGAGTGGC CGGCTCCGGT GGTCGTGGCC ACGGGCAAGG CGTTCCCGTT CCCGGTCGCG CTCTGTCAGT TCGTCGGCAT CGAGCCGTGC GTGATCGCGG AGAACGGTGG CGTCGTCTTC GTCGGCGAGA GCGACGAACT GGTGTTCGGC GGTGATCCGG AGGCCGTCGA CGCCTTCGTC GCGGCGTATC GCGAGCGGGG ACACTCGCTC GGCTGGGGGA ACGTGGACCT GGCGAACCGC TGGCGCGAGA CGGAGATCGC CGTCTCGCTG GACCAGCCCC GCGAACCGTT AGACGAGCTG GCCGAGACCC ACGGTCTGAC CGTCATCGAC ACGGGCTACG CCTACCACGT CAAGTCCCCG GGCGTCGACA AGGGGACGGG GCTGCGGGCG GTCGCCGAGG AACTCGGGTA CGCACCCGGT GACTTTCTCG CGGTCGGCGA CTCGATCAAC GACGTCGCAA CGTTCGAACT GGCCGGCGAG AGCGTCGCCG TCGCCAACGC GGACGAACAC GCGGCCGCGG CGGCCGACCG CCGGACCGAC GCCCGGTACG CCGCGGGGTT CCTCGAAGCG GTCGAACCGT ATCGGTGA
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Protein sequence | MQETPPLVVD VDGTLTGPDQ AVAPRAMTVL AEWPAPVVVA TGKAFPFPVA LCQFVGIEPC VIAENGGVVF VGESDELVFG GDPEAVDAFV AAYRERGHSL GWGNVDLANR WRETEIAVSL DQPREPLDEL AETHGLTVID TGYAYHVKSP GVDKGTGLRA VAEELGYAPG DFLAVGDSIN DVATFELAGE SVAVANADEH AAAAADRRTD ARYAAGFLEA VEPYR
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