Gene Hmuk_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1790 
Symbol 
ID8411316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1710193 
End bp1711086 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID645020120 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_003177611 
Protein GI257387838 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.530432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00975681 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACACAGA ACGAGATGAC GAGCGACGAC AGTACCGATC CCGCTGCCGT TGGGACCACT 
GCCACCCCGG ATCCGTCGGG TGAGCCACTC GTCGACCAGT CGATCGAGGT CGACGGCACC
GACGGCGGTG CCCAGCCCGG CCGAGACACC GTCATCGAGG CCCGAGACCT GAACGTCTTC
TACGGCGACG TACAGGCCCT ACAGGGCATC ACGATGTCGA TCCCCGAGAA TCAGGTGACG
GCGATGATCG GCCCCTCGGG CTGTGGGAAG TCCACGTTCC TGCGCTCGAT CAACCGGATG
AACGACCTCA TCGACGCCGC CAGGGTCGAG GGCGAGCTCT ACTTCGAGGG CAAGAACATC
TACGACGACG ACGTTGACCC GGTCGCACTG CGCCGCCGGA TCGGGATGGT GTTCCAGCAC
CCCAACCCCT TCCCCAAGAG CATCTACGAC AACGTCGCCT ACGGCCTGCG GATCCAGGAC
GAGACCGAGA ACTTAGACCA GAAGGTCGAG ACGGCGCTCA AGCGAGCGGC GCTGTGGGAC
GAGGTCGAGG ACCAACTCGA CAAGTCAGCG CTCGACCTCT CGGGTGGGCA ACAACAGCGC
CTCTGTATCG CGCGGGCCAT CGCGGTCGAC CCCGACGTGA TCCTCATGGA CGAACCGGCG
TCGGCGCTGG ACCCGATCGC CACCTCGAAG ATCGAAGATC TCATCGAGGA ACTGGCAGAA
GAGTTTACTG TCGTCATCGT CACGCACAAC ATGCAACAGG CCGCCCGGAT CTCGGACAAG
ACCGCCGTCT TCCTCACCGG CGGCGAACTC GTCGAGTTCG GCGACACGCA GTCGATCTTC
GAGAACCCGG AGCACCAGCG CGTCGAGGAC TACATCACCG GCAAGTTCGG ATAA
 
Protein sequence
MTQNEMTSDD STDPAAVGTT ATPDPSGEPL VDQSIEVDGT DGGAQPGRDT VIEARDLNVF 
YGDVQALQGI TMSIPENQVT AMIGPSGCGK STFLRSINRM NDLIDAARVE GELYFEGKNI
YDDDVDPVAL RRRIGMVFQH PNPFPKSIYD NVAYGLRIQD ETENLDQKVE TALKRAALWD
EVEDQLDKSA LDLSGGQQQR LCIARAIAVD PDVILMDEPA SALDPIATSK IEDLIEELAE
EFTVVIVTHN MQQAARISDK TAVFLTGGEL VEFGDTQSIF ENPEHQRVED YITGKFG