Gene Hmuk_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1692 
Symbol 
ID8411215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1620753 
End bp1621529 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID645020019 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003177513 
Protein GI257387740 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.350495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA CGTACAGTAT GGATCGGCGG GCGTACATGA AGACCGTCGG GGCTCTCGGA 
GCCACGACGG CGATCGCCGG CTGTTCGAGT AGCGAGGAGA ACACGGAGAC GATCGTTCCC
GGGACGAACT CCGGGTTCCC GCCGTTCGAG TACACCGAGG ACGGCGAACT GGTCGGCTTC
GACATCGAGC TGGCCGAGAC GGTCATCGAC CGGGCCGGCT ACGAGGTCGG CGAGTGGCAG
GACATCGCCT TCGAGTCGCT GATCCCGTCG GTGCTGGACG GCGATATCGA TCTGATCGCC
GCCGGCATGA CGATCGGCCC GGACCGCCAG GAGCAGATCG ACTTCACCGA CCCCTACTGG
GAGTCCAGCC AGGCCGTCCT CGTCCAGGAA GGCGGCGAGT TCCAGCCGGA GTCGGTCGAG
GATCTCGAAG GCGTCCGCGT CGGTGCCCAG GGCGGCACCA CGGGCGAGGG CGAGGCGGAG
GCACTCGTCG AGGACGGACT CGTCGCCGAA GACGACCTCC GGCGCTACGA CAACTACACG
CTGGCAGCCC AGGACCTCGA AAACGGCAAC GTCGACGCCG TGATCGTCGA CGAGCCCGTG
GCCGGGAGCT TCGCGGGCGA CCGTGCGGTC GCGATCGCGT TCGTCATCGA CACCGGCGAG
CAGTTCGGCA TGGGGATGCG TCCCGACGAC GAGCGCCTGA GCGATCTGAA CGACGCGCTC
GCGGAACTGC GCGACGACGG TACATACGAC GAGCTCGTCG GCGAGTGGTT CGAGTGA
 
Protein sequence
MARTYSMDRR AYMKTVGALG ATTAIAGCSS SEENTETIVP GTNSGFPPFE YTEDGELVGF 
DIELAETVID RAGYEVGEWQ DIAFESLIPS VLDGDIDLIA AGMTIGPDRQ EQIDFTDPYW
ESSQAVLVQE GGEFQPESVE DLEGVRVGAQ GGTTGEGEAE ALVEDGLVAE DDLRRYDNYT
LAAQDLENGN VDAVIVDEPV AGSFAGDRAV AIAFVIDTGE QFGMGMRPDD ERLSDLNDAL
AELRDDGTYD ELVGEWFE