Gene Hmuk_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1587 
Symbol 
ID8411109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1513027 
End bp1513932 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID645019913 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003177408 
Protein GI257387635 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC AGACACCCAC GTTCGACGAG CAAGCGGTGA CACACGAACG CGCGACGGTC 
AACGGGGTCG GCCTGCACTA CGTGATCGCC GGCCCGGCAG ACGGCGATCT CGTGGTCTTG
CTCCACGGCT TCCCGGAGTT CTGGTACTCC TGGCACAATC AGCTCCCGTC GCTCGCCGAC
GCCGGCTACC GGGTCGTCGC GCCGGACCTG CGCGGCTACA ACCGCTCGGA GAAGCCACCG
AACGTCGCGG ACTATCGAGT CGACGAACTG GTCGCCGACG TCGCCGGGCT GATCGAGCAC
TGCGGCCGCG AGCGAGCCCA CGTCGTCGGC CACGACTGGG GCGGCCTGAT CGCCTGGCAC
GTCGGCAGCG ACCGTCCCGA GGTCGTCGAC CGCCTGGCCG TCCTGAACGC GCCCCACCCG
ACCAGCTACG AGCGGCTGCT TCGCTCCTCG CCCACCCAGA TCGCGAAGTC CTGGTACGTC
TTCTACTTCC AGTTGCCCGT CCTCCCCGAG CTGGGGTTCC GACTGAACGA CTACGCCGCC
GTGGAGTCGA TCCTGGGCGA GACAGTCCGG CCCGACGCGT TCACCGACGA GGACGTCGAG
CGCTACAAGT CCGCCCTCGC GACGCCGGGC GCACTGACGG CGGCGGTCAA CTACTACCGG
GCGCTCGGTC GCCAGCGAGC GCGGTCGATG CTGACTGGCG GCGGCGAGCC GGACCGCAGC
GTCGACGTGC CGACGCTGCT GCTGTGGGGC GAGCGAGACT TCGCGCTCGA CACCGAACTG
ACCGAGGGAC TCGACGAGTG GGTCGACGAC CTCCGCGTCG AGCGGATTCC CGACGCGAGC
CACTGGGTGC AGTTCGACGC GCCGGAGCGA GTCGACGGGG CTCTCGTCGA CTTCTTCACC
GACTAG
 
Protein sequence
MTSQTPTFDE QAVTHERATV NGVGLHYVIA GPADGDLVVL LHGFPEFWYS WHNQLPSLAD 
AGYRVVAPDL RGYNRSEKPP NVADYRVDEL VADVAGLIEH CGRERAHVVG HDWGGLIAWH
VGSDRPEVVD RLAVLNAPHP TSYERLLRSS PTQIAKSWYV FYFQLPVLPE LGFRLNDYAA
VESILGETVR PDAFTDEDVE RYKSALATPG ALTAAVNYYR ALGRQRARSM LTGGGEPDRS
VDVPTLLLWG ERDFALDTEL TEGLDEWVDD LRVERIPDAS HWVQFDAPER VDGALVDFFT
D