Gene Hmuk_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1518 
Symbol 
ID8411039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1444676 
End bp1445344 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID645019844 
ProductABC transporter related 
Protein accessionYP_003177340 
Protein GI257387567 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TCAGCGCCAC CGACGCGGTG AAGATCTACG AGTCCGGCGA CAAGACGCTG 
CGTGCGCTCG ACGGCGTCTC CGTCGACGTG AACGCCGGTG AGTTCGCGTC CGTCGTCGGC
CCCAGCGGGA GCGGGAAGTC GACCCTGCTG AACCTGCTGG GCCTGCTCGA CGAGCCCTCC
GAGGGCAGCG TCACCGTCGA CGGGACGGCA CTGTCGACGC TCTCGAAGCG CGAACGGACG
GACCTCAGAC GCGAGACCGT CGGATTCATC TTCCAGAGCT TCTACCTGGT GCCGACGCTG
ACCGCGCGCC AGAACGTCGC CGTCCCCGGA CTCGTCCGCG ACGATCGGTC GGATCTGCAG
GCGCGGGCCG ACGAACTGCT CGAACGCGTC GGGCTGGGCG ACCGACTCGA CCACTACCCA
AACGAGCTGT CCGGCGGGCA GAAACAGCGC GTGGCCGTCG CGCGGTCGCT GATCAACGAT
CCCGACATCC TGCTGGCCGA CGAGCCCACG GGGAACCTCG ACCAGGACAC CGGCGCGCAG
GTACTGGACG TGTTCGGCGA GATCACCGAC GAGGGCGTCG CGATCCTCAC CGTCACCCAC
GACGAGCAGG TGACCGACTT CGCCGACCGG ACGATCAGGC TCGTCGACGG GAGGTTAGAC
GATGATTGA
 
Protein sequence
MSVISATDAV KIYESGDKTL RALDGVSVDV NAGEFASVVG PSGSGKSTLL NLLGLLDEPS 
EGSVTVDGTA LSTLSKRERT DLRRETVGFI FQSFYLVPTL TARQNVAVPG LVRDDRSDLQ
ARADELLERV GLGDRLDHYP NELSGGQKQR VAVARSLIND PDILLADEPT GNLDQDTGAQ
VLDVFGEITD EGVAILTVTH DEQVTDFADR TIRLVDGRLD DD