Gene Hmuk_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1317 
Symbol 
ID8410837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1244169 
End bp1244924 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID645019648 
ProductAbortive infection protein 
Protein accessionYP_003177145 
Protein GI257387372 
COG category[R] General function prediction only 
COG ID[COG1266] Predicted metal-dependent membrane protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.254651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGG ATCTGTACCA CACCGCCGAT CGCTCGGTAC GACTGGAGGC CGCCGTCACG 
TCGCTGGCCG TGATCGCGTT CGCCTATCTG GTGGGACTCG TCCTCGCGTC GCTGGGCGTC
AGCGTCGCCG ACGCGCTCGG AGTCACCGAG GCGACCGCAC CGGTCGTCTA CTACTCGGTG
CAGTACGCGC TCTTGCCGGC CGGCTTCCTG GTGGCCGTGT TCGGATACCG CCAGAGCCGC
GAGACGGACG GGCTCGTTCG ATTTCACACT CCGACGATCC GAGACCTGAG CTGGATCGTG
CTGGGCTTTC TCGTCTTGCT GGCCGCGTCG ACTGCCCTAG AGCAGATCGT CGGACTGCTG
GGCGTCGAGA CGGCACAGAA CCAGGCGATC CTCACGGGCC GGGAGCACCC GCTCCTGTTT
CTGATCTTGC TCCCGATCAC GGTGGTGCTG GTCGCTCCGG GCGAGGAGCT GCTCTTTCGC
GGGCTCGTCC AGGGGAAGTT CCGCCAGGCG TACGGCTCGG TGCCGGCGGT CGTGATCGCG
AGCCTGCTGT TCGGACTCTC CCACTCCGGG GCGCTGTCCG GAGCGGGAAC GGTGACCTAC
CTCGCCGTGG CGACGGTGCT GGGACTGGTG CTGGGTGCCG TCTACGAACG CACCGAGAGT
ATCCTCGTTC CGATCGGGAT CCACGCGGCC TGGAACGTCT CGATCTACCT CGGAGAGTGG
CTCCGGGCCG TCTACGGACT CTCGATACTT GGATAG
 
Protein sequence
MGSDLYHTAD RSVRLEAAVT SLAVIAFAYL VGLVLASLGV SVADALGVTE ATAPVVYYSV 
QYALLPAGFL VAVFGYRQSR ETDGLVRFHT PTIRDLSWIV LGFLVLLAAS TALEQIVGLL
GVETAQNQAI LTGREHPLLF LILLPITVVL VAPGEELLFR GLVQGKFRQA YGSVPAVVIA
SLLFGLSHSG ALSGAGTVTY LAVATVLGLV LGAVYERTES ILVPIGIHAA WNVSIYLGEW
LRAVYGLSIL G