Gene Hmuk_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1214 
Symbol 
ID8410734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1157252 
End bp1158325 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID645019548 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_003177045 
Protein GI257387272 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCG TCCTTCTCTC AGGTGGCACG GGCTCACGCC TGCGCCCGAT CACCCATACA 
GGGCCGAAGC AACTTGTACC AGTAGCAAAC AAACCCGTTC TCGAGTACGC GGTCGAAGAC
CTCCGGGGCG CAGGTATCAC CGAGATCGGC GTTATCCTCG GGAACAAAGG CCGTAACGAA
ATCCAGAAAC TGCTAGGCGA CGGCTCCGAC TATGGCGTTG AGATCACGTA CATTGTCCAA
GGAAACCCCC TCGGCCTCGC ACACGCTGCG GGCTGCGCGC GTGACTTCGT CGGCGACGAC
GACTTCGTGA TGTATCTCGG GGACAACATC CTCAAATCGG GCGTCACCGA TCTCGTCGAA
AGCTTTGAGG CGGGTGACTA CGGTGCCGGG ATCGCGCTGC AAGAAGTCGA CGACCCGCAG
GCGTTCGGGA TCACCGACAT CGACGACCAA GGCAACGTCA CAAAACTCAT CGAGAAGCCC
GACGAACCGC CAACGGATCT CGCGTTGATT GGGATGTACG TCTTCTCGCC GGCGATATTC
GACGCTATCA CGGAACTCGA ACCGTCCTGG CGCGGTGAAC TCGAGATTAC GGACGCCATC
CAGCGCCTCC TCGACGACGG GTACGAGATC GACTCGCACG TCGTGACGGG CTGGTGGAAA
GATACCGGCA AGCCCGAGGA CATCCTCGAA GCGAACCGTC TCGTGTTGAA AGACAAGGAA
CTGAATATAT CAGGTACTAT TGAGGACGGC GCAGAGACTG ACGGCCAGAT CGAACTTGCG
GACTCCGCGA TCATCGAAGC GGATGCGGTC GTCCGTGGAC CCGTCTCAAT CGCCGAGAAC
ACGACGATCA AAGACGGAAC GTACGTCGGG CCGTACACCT CGATCGGGGC AAACTCCACC
CTGGAAGACA TCCACATCGA AAACAGTGTC GTCATCGGCG ACTCCGATAT CACCGCCGAC
GGTCGGATCG TCGATAGTCT CCTCGGGCGC AAGGCGAACG TCGAGAGTGC GGCGGAACTC
CTCCCGGAGG GGCGTCGTCT CGTCATCGGT GAAAACTCTC AGCTCAAACT CTAA
 
Protein sequence
MKGVLLSGGT GSRLRPITHT GPKQLVPVAN KPVLEYAVED LRGAGITEIG VILGNKGRNE 
IQKLLGDGSD YGVEITYIVQ GNPLGLAHAA GCARDFVGDD DFVMYLGDNI LKSGVTDLVE
SFEAGDYGAG IALQEVDDPQ AFGITDIDDQ GNVTKLIEKP DEPPTDLALI GMYVFSPAIF
DAITELEPSW RGELEITDAI QRLLDDGYEI DSHVVTGWWK DTGKPEDILE ANRLVLKDKE
LNISGTIEDG AETDGQIELA DSAIIEADAV VRGPVSIAEN TTIKDGTYVG PYTSIGANST
LEDIHIENSV VIGDSDITAD GRIVDSLLGR KANVESAAEL LPEGRRLVIG ENSQLKL