Gene Hmuk_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1178 
Symbol 
ID8410698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1118974 
End bp1119753 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID645019514 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003177011 
Protein GI257387238 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.82399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GCGAGGCAGC GGGGACGGCC CTGATCACGG GTGCCAGCGC CGGGATCGGT 
GCGGCACTGG CCCGGGAGTT CGCTCGCCAC GGACACGACC TCGTCCTCGT GGCCCGCCGA
GAGGACCGTC TCGAATCACT CGCGGCCGAC CTCGAACGCC ACGGCGTCAC GGCTCACGTC
GTCGCGATGG ATCTGGCGGC GGACGACGCG CCCGATCAGC TGTGGGCGAC GCTAGAGGAC
CGTGGCATCT CCGTCCAGAC GCTCGTCAAC AACGTCGGCG TCGGCACGCA CGGCCCCTTC
GCGGAGAGCG ATCCCGACGC GGAGCGGAGA CAGCTCCAGC TCAACGTCTC GGTGCTCGTC
GAACTGACCC GCCGGTTTCT CGACGATCGG GACGCCGGGC AGGTCCTCAA CGTCGGTTCG
GTCGCGGGCT TCGTCCCCGG CGCGTACATG GCGGGCTACT ACGCCAGCAA GGCCTACGTC
AACAGCTTTT CCCAGGCGCT GGCGGCCGAG CACCGGGACA GCGCCCTCGA CGTGACGGTG
CTGTGTCCCG GCCCGACCGA GACGGAGTTC CAGGAGCGGG CGGGGATGGG CGACTCGGCG
GTCGGTCGCA CGCTCTGCTA CACGCCCGAA CGGGTGGCGC GGGCGGGATA CCGGGGGCTC
CAGCGCGGCG ACCCCGTCGT CGTGCCGGGG CTGGCGATGA CCGTCCTCGT GGGTCTGCTC
TCGTTCGTCC CGCGCCCACT CCAGCGGTGG GGAAGCCGGC TCGTCAACGG GAATCGCTGA
 
Protein sequence
MSDSEAAGTA LITGASAGIG AALAREFARH GHDLVLVARR EDRLESLAAD LERHGVTAHV 
VAMDLAADDA PDQLWATLED RGISVQTLVN NVGVGTHGPF AESDPDAERR QLQLNVSVLV
ELTRRFLDDR DAGQVLNVGS VAGFVPGAYM AGYYASKAYV NSFSQALAAE HRDSALDVTV
LCPGPTETEF QERAGMGDSA VGRTLCYTPE RVARAGYRGL QRGDPVVVPG LAMTVLVGLL
SFVPRPLQRW GSRLVNGNR