Gene Hmuk_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1120 
Symbol 
ID8410639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1069618 
End bp1070844 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID645019455 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003176953 
Protein GI257387180 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT ATCTGGACCT GGAGAGCGAC CTCGACGGCG AGGAACGTAT GATCCGCGAC 
ACCGCCCGCG AGTTCGTCGA CGAGCACGTT CGCCCCGAGA TCGGCGAGTG GTTCGAGTCC
GGGACCTCGC CCGACCACCT GTTCGAGGCG ATGGGCGAAC TGGACTTCTT CGCGCCGACG
CTGTCGTGGG GAACGCTTCC GGGAGTGAGT CCCCGCTCGT ACGGCCTGCT CATGCAGGAA
CTGGAGGCCG GCGACTCCGG CGTGCGCTCG ATGGCCAGCG TCCAGGGCGC GCTGGTGATG
TATCCGATCC ACGAGTTCGG AAGCGAGGCC CAGCGAGAGC GATGGCTGCC CGACCTCGCC
GCGGGCGACG CCGTCGGCTG TTTCGGCCTG ACAGAGCCAG AGCACGGCTC TGACCCGGCG
AGCATGGAGA CGACTGCGGT GCCCGACGGG GACGGCTATC GGCTCTCGGG AACGAAGACG
TGGATCACGA ACGCGCCGAT CGCCGACGTG GCCGTGATCT GGTGCAAGAT CGACGACGGG
GACGCCGAGA CCGACGATCC CGTTCGTGGC GTTCTCGTCG ATCTGGACAG TGAGGGCGTC
TCGGAGGAGC AAGGCGAGAC CGAGCCTCGC CAGACCGACC GGTCTGGCGG TGTCGAGACC
AGCGAGATCG ACGGGAAGCT CTCGATGCGG GCCTCTTCGA CCGGCGAGAT CCACCTCCGG
GACGCGTGGG TGCCAGAGGA CGCCCTCCTG CCCGGCGTCG AGGGGATGAA AGGGCCGCTG
TCCTGTCTCA CCGAAGCACG CTACGGCATC GCGTGGGGCG CGGTCGGGGC CGCCCGAGAC
TGCTTCGAGG CGGCCCGCGA GTACGCGACC GACCGCGAGC AGTTCGGCGG CCCGATCGCC
CGCTTCCAGC TCCAACAGGA GAAGCTCGCC GAGATGGCGA CCCGCATTAC GACCGCACAG
CTGCTCGCCG ACAGGCTGGC GACGCTGAAA GCACGCGGCG ATCTGCGCCC CCAGCAGGTG
TCGATGGCCA AGCGCAACAA CGTCCGGATG GCCCGCGAGG TCGCACAGAC CGCCCGCGAG
ATGCTGGGGG GCAACGGGAT CACGACCGAC TACCCGCCGA TGCGCCACGC CGCAAACATG
GAGACCGTCT ACACCTACGA GGGGACTCAC GACATCCACA CGCTGATCCT CGGGGCCGAT
CTGACCGGCA TCGACGCCTT CGAGTAG
 
Protein sequence
MLDYLDLESD LDGEERMIRD TAREFVDEHV RPEIGEWFES GTSPDHLFEA MGELDFFAPT 
LSWGTLPGVS PRSYGLLMQE LEAGDSGVRS MASVQGALVM YPIHEFGSEA QRERWLPDLA
AGDAVGCFGL TEPEHGSDPA SMETTAVPDG DGYRLSGTKT WITNAPIADV AVIWCKIDDG
DAETDDPVRG VLVDLDSEGV SEEQGETEPR QTDRSGGVET SEIDGKLSMR ASSTGEIHLR
DAWVPEDALL PGVEGMKGPL SCLTEARYGI AWGAVGAARD CFEAAREYAT DREQFGGPIA
RFQLQQEKLA EMATRITTAQ LLADRLATLK ARGDLRPQQV SMAKRNNVRM AREVAQTARE
MLGGNGITTD YPPMRHAANM ETVYTYEGTH DIHTLILGAD LTGIDAFE