Gene Hmuk_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1101 
Symbol 
ID8410620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1052534 
End bp1053577 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content69% 
IMG OID645019437 
Producthypothetical protein 
Protein accessionYP_003176935 
Protein GI257387162 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0490804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.681904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG ACGCAGGCGG GATCGGTGAC CTGTTCGACC GTCGGACAGT CGTCCAGATC 
GTCCTGGGGT TCGCCGTCGC CGGCCTCGTT CTCTCCGTGC TGGTCGAGTT CGTCGGGACG
CGCAACGTCC TCGATCGGCT GGCGACGGCG GACCTGCGCT GGCTGGCGAT GGGCTGTCTC
TCGACGCTGC TCTGTCTCAC GTTCTGGGGG AAAGCCTGGC AGATCGTCCT GGACGTGGCC
GGCGTCCGCG AGTCGTTTCG CCGACTGGTC GTGACCTACT ACGCCGCGAC GTTCGCCAAC
TACGTGACGC CCCTGGGCCA GGCCGGGGGC GAGCCCTTCA TCGCCTACGT CCTCTCGCGA
GACACGGACG CCAGCTACGA GGACGCGCTG GCCTCGGTCG TCACGGCGGA CCTGCTGAAC
CTCTTTCCGT TCGTCACCTT CTCCGGGGTG GGCTTTGCGG CCCTGCTCTA CCAGTCGTCG
CTGCCGGCAG TGCTGGAGCC ACTCGCTGTG GCGCTGTTCG CCGTCGCGCT GGGAGTCCCG
GTGCTCGCGG CGGTCGGCTG GCGCTACCGG CTGTCCCTGC GACGAGTCGG TGCCAGCGTC
GTGGTCCCGA TCGTCCGGCT CCTGCCGCGC CTGACCGTCG ACGGGCTCCG GAGCCGCCTT
GCGGAACTGG ACGAGGCCTT CAATCGGATC GCGACGGACC GGAGAGCGCT CGTGCGGGCA
CTTGGCTACT CGTACGTCGG CTGGATCTTC TTCGCGCTCC CGCTGTACTT CGTCGCGATG
GCCGTCGGCG ACGCGGCGAT CCCGCTCTTG CTCGTCTTCT TCATCGTCCC CGCGAGCACG
CTGGGCGGAC TCGCGCCCTC GCCGGGAGGC TCGGGCGCGG TCGAGGCGTT CCTGGTGATT
CTGATCGTCG CGCTCACGCC GATCGCCAGC GACGGAGCAA CCGCCATCTC GATTCTCTAC
CGGGTCGCGA GCTACGTCTT CGCGCTCCTC GTGGGCGGCG CGGCCGCGGT GTTCGTGCTC
CGTCGGAGCT ATAGTAACAA TTGA
 
Protein sequence
MSDDAGGIGD LFDRRTVVQI VLGFAVAGLV LSVLVEFVGT RNVLDRLATA DLRWLAMGCL 
STLLCLTFWG KAWQIVLDVA GVRESFRRLV VTYYAATFAN YVTPLGQAGG EPFIAYVLSR
DTDASYEDAL ASVVTADLLN LFPFVTFSGV GFAALLYQSS LPAVLEPLAV ALFAVALGVP
VLAAVGWRYR LSLRRVGASV VVPIVRLLPR LTVDGLRSRL AELDEAFNRI ATDRRALVRA
LGYSYVGWIF FALPLYFVAM AVGDAAIPLL LVFFIVPAST LGGLAPSPGG SGAVEAFLVI
LIVALTPIAS DGATAISILY RVASYVFALL VGGAAAVFVL RRSYSNN