Gene Hmuk_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0993 
Symbol 
ID8410510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp946636 
End bp947724 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID645019329 
ProductDNA primase, large subunit 
Protein accessionYP_003176829 
Protein GI257387056 
COG category[L] Replication, recombination and repair 
COG ID[COG2219] Eukaryotic-type DNA primase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.438183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC TCCACGCGCG CTACCCGTTC CTGCAGTCGG CCCGCGACGC CGTCGAGGAA 
GCGGCGGTCG ACCTGGGTGA GGTCGTCGCC ACCGACGAGG TCGTCGTCGA GCGCGCCCGC
GAGCGCGTCG AGTGGGCGAT CACCGACGGG AGCGTGGGCG ATCCCCACCG ACGCACGCGC
GTGGAACTGC TGTCGTACCC GGTCGCGCGC GTGCTCGTCT CGCTCGTGAA CACGCCGGTC
TGTACGCGCA AGTACGCCCA GGCCGAGGCC GAGGCCGCTC GCGAGCGGTT CGTCGAGGAG
TTTACCGCCG AAGACACCTT TAGCTACGGC GACAGCGAGT CGTTGTCGCT GTCGGCGCTG
CTCGCGGAGT TCGACCTCAC CGCCGCCGTC CACGAGACCG CGGACCGCTA CCGGATCGAC
GTGGGGACGT ACCTCGAACT GGCGGCCGAC CAGTGGGGCG ACGAGTGGCG ACTGGTCAAC
CGGACGCTGA CCGACGGCGA GGTGCCGGTG ACGACCGAAG AGCTCCACAC GCTGCTCAAG
CAGGCGATTC GCCACCGGAT CGACGACGGC CTGCCCTTCG AGGTGCCGGA CGCCATCGCG
GACGAGCTCG ACGCGGAAGT CGAGTCGATC CAGGCGACGC TGTCGGAGAT GGATCTGACT
CGCGAGATCG ACACGGTCGT TCCCGACCTG TTCCCGCCCT GTATGCAGCA TCTCCTCGAC
GCGGTCCAGA AGGGCGAGCA CCTGGAGCAC CACTCGCGGT TCGCGCTGGC GGCCTTCCTG
ACCTCGATCG GGATGACGAC CGACGAGATC GTCGAGCTGT TCCAGGTCAA CCCCGGCTTC
GGCGAGGAAG CGACGCGCTA TCAGGTCGAT CACATCCGCG GTGACACGAG TCCCACGGAG
TACTCGACAC CCTCGTGTGC GACGATGCAG TCTTACGGCG ACTGCAAGGG GAAAGACGAC
ATCTGCGAGG ACGAGATCAA CGAGTCACAT CCGCTGAACT ACTACGAACA CCGGCTCGAC
GAGACCGACG ACGAGGAGGT CGAAGACTGG CGCGAGAACG AGGCCGACGA CGACGACGGT
GAGGCCTGA
 
Protein sequence
MQPLHARYPF LQSARDAVEE AAVDLGEVVA TDEVVVERAR ERVEWAITDG SVGDPHRRTR 
VELLSYPVAR VLVSLVNTPV CTRKYAQAEA EAARERFVEE FTAEDTFSYG DSESLSLSAL
LAEFDLTAAV HETADRYRID VGTYLELAAD QWGDEWRLVN RTLTDGEVPV TTEELHTLLK
QAIRHRIDDG LPFEVPDAIA DELDAEVESI QATLSEMDLT REIDTVVPDL FPPCMQHLLD
AVQKGEHLEH HSRFALAAFL TSIGMTTDEI VELFQVNPGF GEEATRYQVD HIRGDTSPTE
YSTPSCATMQ SYGDCKGKDD ICEDEINESH PLNYYEHRLD ETDDEEVEDW RENEADDDDG
EA