Gene Hmuk_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0992 
Symbol 
ID8410509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp945840 
End bp946580 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID645019328 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003176828 
Protein GI257387055 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG GACAGACCTG TCTGGTGACC GGCTCCTCTC GCGGGATCGG ACGCGGGATC 
GCCACGGACG TGGCGGCCCA CGGAGCGACC GTGGTCGTCA ACTATCGCTC CTCGGAACGA
GCGGCCGAGG CGGTCGTCGA CGAGATCGAG GCCGACGGCG GCGAGGCGGT CGCCGTTCGG
GGAGACGTGT CGTCGTACGA CGCCGTCGAA CGGATGCACA CGAGGATCCA CGACGCCGTC
GGCCCGGTCG ACGTGGTCGT CAACAACGCC GGGATCACGG TCGACCGGAC CTTCGGGGAG
ATGACCCGCG AGGACTGGGA GGCCGTCATC GACGTGAACC TCGGCGGCGT GTTCAACGTC
AGCCACTGCT TCTACGACGA CATCTGCGAG GCCGAGGACG GCCGTCTGAT CAACGTCTCC
TCGGTCGTCG GCCAGCAGGG CAACTACGGG CAGGCCAACT ACGCGGCGGC CAAGTCCGGC
CTATTCGGGT TCACCCGGAC GCTGGCCCTG GAGATGGCAG CCACCGGATC GACAGCCAAC
TGCGTCGCGC CGGGGTTCGT CGCGACGGAC ATGCTCGACG AGGTCCCCCA GCGCGTCCAG
GAGCGGATCC TCCAGCGGAT CCCGCTGGAC CGGTTCGCAA CGATCGAGGA CATCGCCCCC
GTCGTGCGCT TCCTCGCCAG CCCGGAGTCG CGCTACATGA CCGGCCAGGT GATCGGCGTC
AACGGCGGGA TGGACTGGTA G
 
Protein sequence
MLDGQTCLVT GSSRGIGRGI ATDVAAHGAT VVVNYRSSER AAEAVVDEIE ADGGEAVAVR 
GDVSSYDAVE RMHTRIHDAV GPVDVVVNNA GITVDRTFGE MTREDWEAVI DVNLGGVFNV
SHCFYDDICE AEDGRLINVS SVVGQQGNYG QANYAAAKSG LFGFTRTLAL EMAATGSTAN
CVAPGFVATD MLDEVPQRVQ ERILQRIPLD RFATIEDIAP VVRFLASPES RYMTGQVIGV
NGGMDW