Gene Hmuk_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0933 
Symbol 
ID8410449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp895704 
End bp897791 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content67% 
IMG OID645019268 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003176769 
Protein GI257386996 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.271519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.676616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTC CACTCCAGAC CACCACCAGA CCGACCTTCT GGCAGATCGG ACCGGTCGGC 
AAGGCGGTGT TCTACTACCT CGCGGCGCTG GCGTTGCTCG TGTTCGCCTT CGGCGTGTAC
GAGCGTCTCA CACGCTACAC TCGCGGGAGT GACGAGCCGT TCCCGCGCCT GGACGCGCTT
CCCTCGCGGA TCCTCTCGGG CGCGCGCCTC GCGCTGACCA ACGCCAAGCA GTTCGACCGC
GACCTCGTCG CGGGCGTGAT GCACACCTTC GTCTTCTGGG GGTTCCTGAC GCTGCTGATC
GGGACGACGA TTCTGGGCAT CGACATGGAC CTCTACCGGC CCCTGACCGG CGAGTCCTTC
TTCGTCGGCG AGTTCTACCT CTCCTATTCC TTCGTGATGG ACGCGATGGG GCTGTTGTTC
GTCGTCGGGG TCGGCGTCGC GATGTGGCGG CGGTACGTCC GCCGGACGGA CCGGCTCCAC
GGCCGCCACA CCGCCCGCGA GGACGACTAC TTCCTCGGCG CGCTCTTCCT GCTCGGCGTC
GGCGGGTACG TCACCGAGGC CGTCCGCATC CTCGGGACGA GCGCGGTCCG AAACGTGAGC
TTCGAGACGT GGAGTTTCGT CGGCTGGGCG GGCAAGGAGT GGCTCGCCGC TGCAGGTGTT
TCCCCCGAGA TGGCGGCCGC CGCCTACCCC GTGATCTGGT GGAGCCACTC GCTGCTGGCG
CTGGCCTTCG TCGCCTGGGT GCCCTACGCC AAGCCCTTCC ACATGCTGTC GTCCTTTGCC
AACGTCGTCA CTCGCGACGA GAAGGCCGGC AAGCGCCTCC CCGGCGTCCC CGAAGACGCC
AGCCCGGAGG AGATCGGCCC AAGCGAGATC GACGACTTCT CCTGGAAACA GCTGCTCGAT
CAGGACGCCT GCACGAAGTG TGGCCGCTGC TCGTCGGCGT GTCCGGCCAA GGAGTCGGGC
CGCCCGCTCG ATCCGCGCGA CGTGATCCTC GACCTGAAGC AGTACCGCGA AGAACGGGAC
GCCGGGGGCG AGGCCGTCGA CATCGTCGCG GATGGGGGTA CATCAGTCGT CGACAGCGCG
ACGATGGAGT CCTGCATGGC CTGTATGGCC TGCATGGACG CCTGTCCGGT CGAGATCGAA
CACCTCACTC ACTTCACCGA GATGAACCGC CGGCTGACGG AGTCGGGCCA GATGGACGAA
CACGTCCAGG ACGCCATGAT GAACGTCTTC CAGCAGGGCA ACACCTTCGG CGAACCCGAA
CGCAAGCGGC CCGACTGGAC CGAGGAACTG GATTTCGACG TGCCCGACGC CCGCGAGGAG
CCCGTCGACT ACTGCTGGTA CGTCGGCGAC TACCCCAGCT ACGACGACCG CAACCAGGAG
ATCGCCAAGG CGCTGGCCCG CGTGTTCGAA GCCAGCGACG CCTCCTACGG CATCCTCTAC
GAGGACGAGC AGACCGACGG CAACGACGTG CGCCGCGTCG GCGAGGAGGG GCTCTACGAG
ATGCTCGTCG AGGACAACGC GGCCGCTATC CAGGACTGCG AGTTCGGCCG GATCGTCTGT
ACGGACCCCC ACTCGTTCAA CACGTTCAAA CACGAGTACC CCGAGTTCGA GGCCTGCGAG
TGGGAGGGAG ACGACGTGGC CCACTACACG CAGGTCGTCG CCGACCTCGT CGAGACCGGG
CGACTGGCCG TGCCGGCGAC GCTCACAGAC ACCGTCACCT ACCACGACCC CTGCCACCTC
GGGCGGTACA ACGGCGAGTT CGAGGCCCCG CGGGCGCTGA TCGACGCGAC GGGCGTCGAC
CGCGTGGAGA TGCCCCGCAA CCGCGACGAC TCCTTCTGCT GTGGCGGGGG CGGGGGCGGC
CTCTGGATGG ACCTCGAAGA GGAGGCAAAA CCCAGCGAAG AGCGCCTGCG CGAGGCCCTG
GAGGACACCG AAGCGGGCGC GACCGTGGAT CGCTTCGTCG TCGCCTGCCC GATGTGCATG
ACGATGTACG AGGACGGCCG CAAGACCGGC GACTACGAGG ACGACATCGA GATCGTCGGC
GTCACCGAAC TGCTGGCCGA AGCGATCGCC GCCGAGAGCG CGGCCTAA
 
Protein sequence
MTVPLQTTTR PTFWQIGPVG KAVFYYLAAL ALLVFAFGVY ERLTRYTRGS DEPFPRLDAL 
PSRILSGARL ALTNAKQFDR DLVAGVMHTF VFWGFLTLLI GTTILGIDMD LYRPLTGESF
FVGEFYLSYS FVMDAMGLLF VVGVGVAMWR RYVRRTDRLH GRHTAREDDY FLGALFLLGV
GGYVTEAVRI LGTSAVRNVS FETWSFVGWA GKEWLAAAGV SPEMAAAAYP VIWWSHSLLA
LAFVAWVPYA KPFHMLSSFA NVVTRDEKAG KRLPGVPEDA SPEEIGPSEI DDFSWKQLLD
QDACTKCGRC SSACPAKESG RPLDPRDVIL DLKQYREERD AGGEAVDIVA DGGTSVVDSA
TMESCMACMA CMDACPVEIE HLTHFTEMNR RLTESGQMDE HVQDAMMNVF QQGNTFGEPE
RKRPDWTEEL DFDVPDAREE PVDYCWYVGD YPSYDDRNQE IAKALARVFE ASDASYGILY
EDEQTDGNDV RRVGEEGLYE MLVEDNAAAI QDCEFGRIVC TDPHSFNTFK HEYPEFEACE
WEGDDVAHYT QVVADLVETG RLAVPATLTD TVTYHDPCHL GRYNGEFEAP RALIDATGVD
RVEMPRNRDD SFCCGGGGGG LWMDLEEEAK PSEERLREAL EDTEAGATVD RFVVACPMCM
TMYEDGRKTG DYEDDIEIVG VTELLAEAIA AESAA