Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0872 |
Symbol | |
ID | 8410387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 841912 |
End bp | 842601 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645019207 |
Product | ABC transporter related |
Protein accession | YP_003176709 |
Protein GI | 257386936 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0610304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAATG ACGCACCAGA CCTCGTGGTC GACGGTCTCA CAAAGCGTTT CGACGACGGT GCGGTGACCG CGGTGGACGA CCTGTCGTTC ACCGTCGAAC CCGGCTCGGT GGTGGGGCTG CTCGGTCCGA ACGGGGCGGG GAAGACGACG ACGATCAAAT CCATACTCGG GCTGGTGATT CCGGATTCGG GATCTGTCGA GGTCGGTGGC GTCGACGTTC ACGACCGTCC TCGACTCGCC CACCGACAGA TCGATGCGAT GCTCGAGGGG GCGAGGAACA ACTATTGGCG ACTGACCGTC GAGGAAAATC TGCGTTATTT TGCCGGAATT AGCGGTCTGG ATCCAGATGC CGTTCTCGAA GAGTGTGACG AGATTCTCCA GCGGTTTGAA ATCGATGAGA AGCGCGACGA GGTGGTCCGG AATCTCTCGC GCGGAATGAA ACAGAAAGTT TCGCTGGCCA GCGTCCTCGT CACCGACGCA TCGATCGTCT GTATCGACGA ACCAACACTC GGTCTGGACG TTGAAAGCAC CAGGCAACTC AAGAAAGAAC TCCGAAACAC GATCGACCAG CAGGACATGA CGGTACTGCT TTCGAGTCAC GATATGGACG TCATTGAGGA CGTCTGTGAT CGAGTTATTA TCATGCACGC TCTTGCGAAG GAGATTGTTG ATAGCGATGG CTGGAGCTGA
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Protein sequence | MSNDAPDLVV DGLTKRFDDG AVTAVDDLSF TVEPGSVVGL LGPNGAGKTT TIKSILGLVI PDSGSVEVGG VDVHDRPRLA HRQIDAMLEG ARNNYWRLTV EENLRYFAGI SGLDPDAVLE ECDEILQRFE IDEKRDEVVR NLSRGMKQKV SLASVLVTDA SIVCIDEPTL GLDVESTRQL KKELRNTIDQ QDMTVLLSSH DMDVIEDVCD RVIIMHALAK EIVDSDGWS
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