Gene Hmuk_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0796 
Symbol 
ID8410310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp768813 
End bp770582 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content68% 
IMG OID645019131 
Productglycyl-tRNA synthetase 
Protein accessionYP_003176634 
Protein GI257386861 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GCGGCGACCT CGTCGAGTTG GCCAAGCGCA GGGGCTTTTT CCTGCAGTCG 
GCCGGGGCGT ACGGCGGCGT CTCGGGGTTC TACACCTTCG GTCCCTCCGG GGCCGCGCTC
AAACAGAACA TCGAGGATAC CTGGCGCAAC CGCTTTGCGA TCCAGGAGGG CAACATGGAG
GTCGACGCCC CGACCGTGAT GCCAGAGCCC GTCTTCGAGG CCTCGGGCCA CCTCGATGGC
TTCGACGACA TGCTCGTGGA GTGCCCGGAG TGTGGCGAGA GCCACCGGGC CGACCACATC
GTCGAGGACA ACACCGACAT CGAGGAGGCC GAGTCGATCC CGGTCGCCGA GGTCGAGGAG
CTGATCGCCG AGTACGAACT CGTCTGTCCG ACCTGTGGCA CCGGGCTGGC CGGCCAGGCC
ATCGAGGACT TCAACCTCAT GTTCGAGACG AACATCGGCC CCGGCTCCGC CGATCCGGGC
TATCTGCGCC CCGAGACCGC CCAGGGCATC TTCATCGAAT TCCCACAGCT CGCGGAGTAC
GCCCGCAACC AGCTTCCCTT CGGCGTCACA CAGATCGGCC GGGCCTACCG CAACGAGATC
AGCCCGCGCA AGTCCCTGCT GCGAGTCCGG GAGTTCACCC AGGCCGAGCT CGAGCTGTTC
GTCGATCCCG AGGAAGACGA GCCGGCACTC GAAGCGGTCG CGGACGTGAC CGCTCCGTTC
TACCCCGCCG CCGATCAGGA GGCCGCGGAC GGCCAGCCCT ACGAGGCCAC GATCCGCGAG
GTCGTCGACG ACGGCGTCGT CGGCAAGCCA TGGATCGCCT ACTACCTCGG CGTCGCCAAG
CAGTGGTACG AGTCGATCGG CGTCGACATG GACCGCTTTC GCTTCCGCCA GCACCTCTCG
GGCGAGCGAG CCCACTACGC CGCGGACTGC TGGGACGCCG AAGCGGAGGT CGACGGCGAC
TGGATCGAAC TGGGCGGCTT CGCCTACCGA TCCGACTACG ACCTCTCGAA ACACGACAGC
TACTCCGACG AGGAGTTCAC GGTCTTCAAG CAGTACGACG AGCCGGTCAC CGTCGAGCGA
GCGACGGTCG ACCCGGACAT GAGCTACCTC GGACCGGAGT TTGGCGGCTC GGCCGGCGCG
GTCGCCGACG CCCTCGAAGC ACTCGCCGAG CGCGATCCCG ACGCCTTCGA CGAATCGGAG
GTCGTCGTCG AGGTCGACGG CGAGTCACAC GCGGTCCCCG TCGAGAAGAC CAACTTCGGC
GTCGAGGAAG TCATCGAGTC GGGCGAACAC ATCACGCCCC ACGTCGTCGA GCCCTCGCTG
GGTATCGACC GGGCGCTGTA CACGGCGCTG GATCACTCCT ATCGCGAGGA CGAGGTCGAC
GGCGAGGAAC GCACCTATCT GGCACTGCCA CAGGAAGTCG CGCCGACGAC CGTCGGCGTC
TTCCCGCTGA TGGACCGAGA CGGCATGGGC GAGTACGCTC GCGACCTCGT CGAGAAGCTG
CGCGCGGCCG GCCTGGCCGT GACCTACGAC GATTCGGGCG CGATCGGCCG ACGCTACCGC
CGCCAGGACG AGGTCGGCAC GCCGTTCTGT GTCACCGTCG ACTACGCGAC GCTCGGGGAG
GCCCGCGACG ACGAGGGCGA ACCGGCAGCG CCAGACACCG TCACGGTCCG CGAGCGAGAT
ACGACGGCAC AGAAACGCGT TCCGGTCGCC GATCTCCCCG AGACGCTGAC GGCGCTCCGG
GACGGCGAGC GCACCTTCGA CGACCTGTAG
 
Protein sequence
MSDGGDLVEL AKRRGFFLQS AGAYGGVSGF YTFGPSGAAL KQNIEDTWRN RFAIQEGNME 
VDAPTVMPEP VFEASGHLDG FDDMLVECPE CGESHRADHI VEDNTDIEEA ESIPVAEVEE
LIAEYELVCP TCGTGLAGQA IEDFNLMFET NIGPGSADPG YLRPETAQGI FIEFPQLAEY
ARNQLPFGVT QIGRAYRNEI SPRKSLLRVR EFTQAELELF VDPEEDEPAL EAVADVTAPF
YPAADQEAAD GQPYEATIRE VVDDGVVGKP WIAYYLGVAK QWYESIGVDM DRFRFRQHLS
GERAHYAADC WDAEAEVDGD WIELGGFAYR SDYDLSKHDS YSDEEFTVFK QYDEPVTVER
ATVDPDMSYL GPEFGGSAGA VADALEALAE RDPDAFDESE VVVEVDGESH AVPVEKTNFG
VEEVIESGEH ITPHVVEPSL GIDRALYTAL DHSYREDEVD GEERTYLALP QEVAPTTVGV
FPLMDRDGMG EYARDLVEKL RAAGLAVTYD DSGAIGRRYR RQDEVGTPFC VTVDYATLGE
ARDDEGEPAA PDTVTVRERD TTAQKRVPVA DLPETLTALR DGERTFDDL