| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0679 |
|---|
| Symbol | |
|---|
| ID | 8410192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 641515 |
|---|
| End bp | 642276 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645019013 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003176517 |
|---|
| Protein GI | 257386744 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.103832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGT CCCCGGCAAT CGCCACGGAC GGACTGAGCA AGCGGTACGG CTCGACGACG
GCCGTCGCCG ACCTCGATCT GACGGTCCCC TCCGGCGTCG TGTACGGCTT TCTCGGCCCC
AACGGCGCGG GCAAGACGAC GACGATGCGG ATGCTGACCG GACTGGTCGA ACCGAGCGAG
GGGACGGCCA CGGTCGCTGG CGTCCCGAGC GACGACCGCC GACAGCTCGT CGACCGGATC
GGTCTGTTAC CGGAGGAGCC GCCGCTGTAC GAGGAACTGA CCGGGCGGGA ACAGCTGGAG
TTTGCCGCCG ACCTCCGTCG CGTTCCCTTC GAGCAGATCG CCGATCGAGC GCTGGGGCTG
TGCGACCGAC TGGGGCTGGG CGAGGACCTC GATCGCCGCG TCGACGGCTA CTCGAAGGGG
ATGCGCCAGA AGACCGCCTT CGTCCAGGCC GTCCAGCACG ATCCGAGCGT CGTCTTCCTC
GACGAGCCCA CCTCCGGGCT CGACCCCCGC GCGGCCAAGA CCCTGCGGGA GCTGATCGTC
GAGCTCGCGG CCGACGACAC CACCGTCTTC CTCTCGACGC ACATCCTCCC GGTCGTCGAG
GAGATCGCCG ATCGGGTGGG CGTCCTCCAC GACGGCCGCC TCGTCGCGGA GGGACCGCCG
GGAGAGCTGA TCGGATCGGT CGAGACGGAG GGGGGCGCGG ACCTCGAAGA CGCCTTCCTC
GCGCTGACCG GCGACGCCAG CGAGGCCTAT GCGACGGAGT GA
|
|---|
| Protein sequence | MTVSPAIATD GLSKRYGSTT AVADLDLTVP SGVVYGFLGP NGAGKTTTMR MLTGLVEPSE
GTATVAGVPS DDRRQLVDRI GLLPEEPPLY EELTGREQLE FAADLRRVPF EQIADRALGL
CDRLGLGEDL DRRVDGYSKG MRQKTAFVQA VQHDPSVVFL DEPTSGLDPR AAKTLRELIV
ELAADDTTVF LSTHILPVVE EIADRVGVLH DGRLVAEGPP GELIGSVETE GGADLEDAFL
ALTGDASEAY ATE
|
|---|
| |