Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0563 |
Symbol | |
ID | 8410068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 532887 |
End bp | 533894 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645018892 |
Product | histone deacetylase superfamily |
Protein accession | YP_003176404 |
Protein GI | 257386631 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.349825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.347907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCG GCTACCGCGA GGTCTGCCTC GACCACGACA CGGGTCCGCG CCACCCCGAG AGTGCCGATC GACTCCGGGC GATCAGGCGG GGCCTCGCGG AATACCACGG CGTCGAGTAC GTCGCCGCGG GCGACGCCGA CGAGGAACTG ATCTGCAAGG TCCACGATCC CGACTACGTC GAGGAGATCA AGGCGTTCTG CCAGGAGGGT GGCGGCAACT GGGACGCAGA CACCGTCGCC GTCGAGGACA CCTGGAAGGC CGCACTCGCC AGTGCCGGCC TCGCCGAGTG GGCCGCGCTC TCGGCGCTGG ACGGCGACGA CGGTCGCGAG ACGCCGTTCG CGCTCGGCCG TCCGCCCGGC CACCACGCGG TCGCGGACGA CGCGATGGGA TTTTGCTTCG TCGACAACGC CGTCGTCGCC GCCCAGTCGG CCCTCGACGA GGGTGCCGAC GGGGTCGCGA TCTTCGACTG GGACGTTCAC CACGGCAACG GGACCCAGGA CATCTGCTAC GACCGCGACG ACATCTTCTA CGCGTCGATC CACGAGGAGG GCCTGTATCC GGGGACCGGC GAGGTCGACG AGACGGGGAC CGGTGACGGC GCGATGAGGA CTCTCAACGT CCCCTACGAT CCCGGTGCCG ACACCGTCGA CTACCTGGCT GCCGTCGACG AGCTGATCGC CCCGGAGATC GAGTCGTTCG ATCCCGACCT CCTGCTGGTC AGCGCCGGCT TCGACGCCCA TCGCCACGAT CCGATCTCCC GGATGCGGGT CTCCTCGGAG GGGTACGGAC TCCTCACCCA GCGGATGCGC GACCTCACCG ACCGCTGTGA CGCCGGCCTC GGCTTCGTTC TCGAAGGCGG CTACAGTCTC GATACCCTGA CCGACAGCCT CACGACCGTC CACGAGGTCT TCGACGGCTA CCAGCCCTCA CAGCCCGACG GATCGGTCAG CGAGGACGCC CGCGACGTGC TCGACGCTCT GGTCGATCAG GGCTTCGGAT CGACGTAG
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Protein sequence | MNFGYREVCL DHDTGPRHPE SADRLRAIRR GLAEYHGVEY VAAGDADEEL ICKVHDPDYV EEIKAFCQEG GGNWDADTVA VEDTWKAALA SAGLAEWAAL SALDGDDGRE TPFALGRPPG HHAVADDAMG FCFVDNAVVA AQSALDEGAD GVAIFDWDVH HGNGTQDICY DRDDIFYASI HEEGLYPGTG EVDETGTGDG AMRTLNVPYD PGADTVDYLA AVDELIAPEI ESFDPDLLLV SAGFDAHRHD PISRMRVSSE GYGLLTQRMR DLTDRCDAGL GFVLEGGYSL DTLTDSLTTV HEVFDGYQPS QPDGSVSEDA RDVLDALVDQ GFGST
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