Gene Hmuk_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0563 
Symbol 
ID8410068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp532887 
End bp533894 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID645018892 
Producthistone deacetylase superfamily 
Protein accessionYP_003176404 
Protein GI257386631 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.349825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.347907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG GCTACCGCGA GGTCTGCCTC GACCACGACA CGGGTCCGCG CCACCCCGAG 
AGTGCCGATC GACTCCGGGC GATCAGGCGG GGCCTCGCGG AATACCACGG CGTCGAGTAC
GTCGCCGCGG GCGACGCCGA CGAGGAACTG ATCTGCAAGG TCCACGATCC CGACTACGTC
GAGGAGATCA AGGCGTTCTG CCAGGAGGGT GGCGGCAACT GGGACGCAGA CACCGTCGCC
GTCGAGGACA CCTGGAAGGC CGCACTCGCC AGTGCCGGCC TCGCCGAGTG GGCCGCGCTC
TCGGCGCTGG ACGGCGACGA CGGTCGCGAG ACGCCGTTCG CGCTCGGCCG TCCGCCCGGC
CACCACGCGG TCGCGGACGA CGCGATGGGA TTTTGCTTCG TCGACAACGC CGTCGTCGCC
GCCCAGTCGG CCCTCGACGA GGGTGCCGAC GGGGTCGCGA TCTTCGACTG GGACGTTCAC
CACGGCAACG GGACCCAGGA CATCTGCTAC GACCGCGACG ACATCTTCTA CGCGTCGATC
CACGAGGAGG GCCTGTATCC GGGGACCGGC GAGGTCGACG AGACGGGGAC CGGTGACGGC
GCGATGAGGA CTCTCAACGT CCCCTACGAT CCCGGTGCCG ACACCGTCGA CTACCTGGCT
GCCGTCGACG AGCTGATCGC CCCGGAGATC GAGTCGTTCG ATCCCGACCT CCTGCTGGTC
AGCGCCGGCT TCGACGCCCA TCGCCACGAT CCGATCTCCC GGATGCGGGT CTCCTCGGAG
GGGTACGGAC TCCTCACCCA GCGGATGCGC GACCTCACCG ACCGCTGTGA CGCCGGCCTC
GGCTTCGTTC TCGAAGGCGG CTACAGTCTC GATACCCTGA CCGACAGCCT CACGACCGTC
CACGAGGTCT TCGACGGCTA CCAGCCCTCA CAGCCCGACG GATCGGTCAG CGAGGACGCC
CGCGACGTGC TCGACGCTCT GGTCGATCAG GGCTTCGGAT CGACGTAG
 
Protein sequence
MNFGYREVCL DHDTGPRHPE SADRLRAIRR GLAEYHGVEY VAAGDADEEL ICKVHDPDYV 
EEIKAFCQEG GGNWDADTVA VEDTWKAALA SAGLAEWAAL SALDGDDGRE TPFALGRPPG
HHAVADDAMG FCFVDNAVVA AQSALDEGAD GVAIFDWDVH HGNGTQDICY DRDDIFYASI
HEEGLYPGTG EVDETGTGDG AMRTLNVPYD PGADTVDYLA AVDELIAPEI ESFDPDLLLV
SAGFDAHRHD PISRMRVSSE GYGLLTQRMR DLTDRCDAGL GFVLEGGYSL DTLTDSLTTV
HEVFDGYQPS QPDGSVSEDA RDVLDALVDQ GFGST