Gene Hmuk_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0249 
Symbol 
ID8409747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp244932 
End bp246881 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content65% 
IMG OID645018574 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003176093 
Protein GI257386320 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.818648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0240332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AGTACCTCGA TGCGTTTATT CGAGAGAGCG AAGAGGCGAT CACGGAACTG 
AACAACTCCC TGCTGGATCT GGAGTCGGAT CCGGAGGACA CGGAAGCGAT GGAGTCCATC
TTCCGGACGG CACACACGCT CAAAGGGAAC TTCGGCGCGA TGGGGTTCGA CGACGCGTCG
TCGCTGGCCC ACGCTATCGA AGACCTCCTG GACGAGATGC GGGACGGTAA CATGCCCGTC
ACGCCGGACG TGATGGACCT GATCTTCGCG GGCGTGGACA AGATAGAGGC CATCGTCAGC
GAGATCGAGG AACACGGCGA GTCCGGGACC GACGTAGACG AGATCGTCGA CGACCTCCGA
ACGGTCCTCG AAGAGGGCGT CGACGCCGCC GAGGGCGCGG CCGACGACGC GGACGGTCCG
GACGAGGCCC CGGACGATAC GACCGACACG GACTCGTCCG GAGACGGAGA CGTTGCCGTC
GAGACGAACG TCAGTCCCGA CACGGCCGAC GACAGCATCA TCGCCGCGGA GATCGACATC
GGCGACTCCG ACATGCTGGG CGTCGACGCG ATGCTGGCGA TCGAGGCCGT CGAGGACTAC
TTCGACGTGC TCGATGCCGC CCCACAGCGC GAGGCCGTCG AAGACGGGGA GTTCAGCGAT
ACGTTCACCC TGTACCTCGA CGCCGAAGAC ACCGGGACCG TCGACAACAC GCTTTCCGGG
ATCGGCAAGA TCGAGAGCGC GGAGACGGCA GACGTGACCG ACGCACTCAG CGAGAAAAGC
GGGAGCACCA GCGACGAGAC CGAACACAAG GTCGACGAGA TCAAGTCCGT CCGCGTCGAC
GTCGACCAGC TCGACGATCT CCACGGACTG GTCGAGCAGC TGGTGACCAG CCGAATCAAG
CTCCGCCGTG CCGTCGAGCA GGACGACCTC GACGGAGCCG GCGAGAACCT CAACGAGCTG
GACAAGATCA CGGCGAACCT CCAGAACACC GTGATGGACA TGCGTCTGAT CCCGCTGAAG
AAGGTCGTCG GGAAGTTCCC GCGGCTGGTT CGGGACCTCT CGCGGGATCT GGGCAAGGAG
GTCGACTTCG AGATCGAGGG CGAAGACATC GAACTCGACC GGACGATCCT CACGGAGATC
TCCGACCCGC TGATGCACAT CCTGCGCAAC TCCGTCGACC ACGGCATCGA GCCACCGGAG
GTCCGCGAGG AGAAGGGCAA GCCACGCACG GGCACGGTCG AACTCAGGGC CTCCCGCGAG
CGCGATCACG TCATCATCCA GGTCGAGGAC GACGGGGCCG GCCTCGACGT CGAGGCGATC
AGAGACAAGG CCATCGAGAA GGGCGTCCGT TCGCCCGAAG AGTTAGAGGC GATGGACGAC
TCCTCGATCT ACGACCTGGT CTTTCACCCC GGCTTCTCGA CGGCCGACCA GGTCACCGAC
ACGAGCGGCC GCGGCGTCGG CATGGACGTG GTCCACGACA CCGTCACACA ACTGGACGGG
TCGGTCAACG TCGAGTCGAC GCCGGGCGAG GGGACGACGG TGTCGCTTCG CCTGCCGGTG
ACGATGGCGA TCGTCAAGGT GCTGTTCGTC GAGGTCGGCG ACGAGGAGTA CGGGATCCCG
CTGAAGAACG TCGACGAGAT CACCCGTGCC GACGACCGCA AGCAGGTCAA CGGCAAGGAC
GTGATCAAGC ACAACGACGA GATCTACCCG ATCATTCAGC TGGGCGAGAC GTTCGACGCG
CCCGGCGAGA CCGCCAACGG CGACGGGATG CTCGTCCGCG TCCGGGAGTC CGAGCGCCAG
GTCGCGTTGC ACTGTGACTC GGTCAACAGC CAGGAGGAAG TCGTCGTCAA GCCGCTGGAG
GGGATCCTCA GCGGAACGCC CGGCCTGTCC GGGACCGCGG TGCTCGGCGA CGGAAACATC
GTCCACATCC TCGACGTGGT GACGCTATGA
 
Protein sequence
MNDQYLDAFI RESEEAITEL NNSLLDLESD PEDTEAMESI FRTAHTLKGN FGAMGFDDAS 
SLAHAIEDLL DEMRDGNMPV TPDVMDLIFA GVDKIEAIVS EIEEHGESGT DVDEIVDDLR
TVLEEGVDAA EGAADDADGP DEAPDDTTDT DSSGDGDVAV ETNVSPDTAD DSIIAAEIDI
GDSDMLGVDA MLAIEAVEDY FDVLDAAPQR EAVEDGEFSD TFTLYLDAED TGTVDNTLSG
IGKIESAETA DVTDALSEKS GSTSDETEHK VDEIKSVRVD VDQLDDLHGL VEQLVTSRIK
LRRAVEQDDL DGAGENLNEL DKITANLQNT VMDMRLIPLK KVVGKFPRLV RDLSRDLGKE
VDFEIEGEDI ELDRTILTEI SDPLMHILRN SVDHGIEPPE VREEKGKPRT GTVELRASRE
RDHVIIQVED DGAGLDVEAI RDKAIEKGVR SPEELEAMDD SSIYDLVFHP GFSTADQVTD
TSGRGVGMDV VHDTVTQLDG SVNVESTPGE GTTVSLRLPV TMAIVKVLFV EVGDEEYGIP
LKNVDEITRA DDRKQVNGKD VIKHNDEIYP IIQLGETFDA PGETANGDGM LVRVRESERQ
VALHCDSVNS QEEVVVKPLE GILSGTPGLS GTAVLGDGNI VHILDVVTL