Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0202 |
Symbol | |
ID | 8409700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 198362 |
End bp | 198934 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645018527 |
Product | isochorismatase hydrolase |
Protein accession | YP_003176046 |
Protein GI | 257386273 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00287334 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTCG AGCCAGCACG AACCGCACTC GTCGTCGTCG ACATGCAAAA CGGCTTCTGT CACCCGGACG GGGCGCTGTA CGCGCCCGAC AGCGAGGCGG CCATCGAGCC CTGCCGCGAG CTGGTCGAGC GCGCACGCGA GGCCGGTGCC AGCGTCGTCT TCACCCGCGA CGTACACCCG CCCGAACAGT TCGAAGACGC ACACTACTAC GACGAGTTCG ACCGCTGGGG CGAGCACGTC ATCGAGGGGT CCTGGGAGAC GGAGCTGGTC GCACAGCTCG AACCGGCCGA AGACGACCTC GTCGTCGTCA AACACACCTA CGACGCCTTC TACGAGACCC AGCTGGAGGG GTGGCTCGAC GCCCACGGGA TCGACGACCT CGTCGTCTGC GGCACGCTCG CGAACGTTTG CGTGTTGCAC ACGGCCTCCA GCGCCGGCCT GCGCGACTTC CGCCCGGTGC TGGTCGAAGA CGCCATCGGC GCGATCGAGG ACGACCACCG CGAGTACGCA CTGGACCACG CGGACTGGCT GTTCGGCGAG GTGACCGAGC GCGGCGAGAT CACCTTCGCT TGA
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Protein sequence | MEFEPARTAL VVVDMQNGFC HPDGALYAPD SEAAIEPCRE LVERAREAGA SVVFTRDVHP PEQFEDAHYY DEFDRWGEHV IEGSWETELV AQLEPAEDDL VVVKHTYDAF YETQLEGWLD AHGIDDLVVC GTLANVCVLH TASSAGLRDF RPVLVEDAIG AIEDDHREYA LDHADWLFGE VTERGEITFA
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