Gene Hmuk_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0202 
Symbol 
ID8409700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp198362 
End bp198934 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID645018527 
Productisochorismatase hydrolase 
Protein accessionYP_003176046 
Protein GI257386273 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00287334 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG AGCCAGCACG AACCGCACTC GTCGTCGTCG ACATGCAAAA CGGCTTCTGT 
CACCCGGACG GGGCGCTGTA CGCGCCCGAC AGCGAGGCGG CCATCGAGCC CTGCCGCGAG
CTGGTCGAGC GCGCACGCGA GGCCGGTGCC AGCGTCGTCT TCACCCGCGA CGTACACCCG
CCCGAACAGT TCGAAGACGC ACACTACTAC GACGAGTTCG ACCGCTGGGG CGAGCACGTC
ATCGAGGGGT CCTGGGAGAC GGAGCTGGTC GCACAGCTCG AACCGGCCGA AGACGACCTC
GTCGTCGTCA AACACACCTA CGACGCCTTC TACGAGACCC AGCTGGAGGG GTGGCTCGAC
GCCCACGGGA TCGACGACCT CGTCGTCTGC GGCACGCTCG CGAACGTTTG CGTGTTGCAC
ACGGCCTCCA GCGCCGGCCT GCGCGACTTC CGCCCGGTGC TGGTCGAAGA CGCCATCGGC
GCGATCGAGG ACGACCACCG CGAGTACGCA CTGGACCACG CGGACTGGCT GTTCGGCGAG
GTGACCGAGC GCGGCGAGAT CACCTTCGCT TGA
 
Protein sequence
MEFEPARTAL VVVDMQNGFC HPDGALYAPD SEAAIEPCRE LVERAREAGA SVVFTRDVHP 
PEQFEDAHYY DEFDRWGEHV IEGSWETELV AQLEPAEDDL VVVKHTYDAF YETQLEGWLD
AHGIDDLVVC GTLANVCVLH TASSAGLRDF RPVLVEDAIG AIEDDHREYA LDHADWLFGE
VTERGEITFA