Gene Hmuk_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0085 
Symbol 
ID8409582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp82267 
End bp83562 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content52% 
IMG OID645018412 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003175932 
Protein GI257386159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.896059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG TATGCGTACA TGGGTTGGGG TATATTGGTC TTCCAACTGC GGCGATGTTA 
GCAAACTACG GGCACACTGT TATTGGGTAT GATGTTGACG AAGAGCTGGT AAATGATCTC
CAAGCAGGCC AAATCACGTT TGACGAGCCA GGCCTGCAGG CCTTTGTTAC AGAGGCTTTG
GAGTCAGGGA ATCTGGAGGT GTCTGATGAA GTAGGGCCAG CCAAGTATCA CATTATTGCG
GTGCCCACTC CATTCGATGA GGAAGCGAAA GTCGCTGATA TAAGCTATAT CGAAGCCGCG
GGCGAGGCTA TCACACCTCA TCTTCGCCCA GGTGATTCTG TAATCCTAGA GTCAACAGTG
CCTCCGGGAA CAACTGTCAA CACGTTACAA CCAGTACTTG AGGAATCCGG TCTAGCGGCC
GGCAACGACT TTGCATTAAT TCACTGCCCA GAAACCGTGC TGCCGGGTAA TATCATCACG
GAATTACGAG AGAATGATCG CATAATCGGT GGTGTCAACG GCGTCTCGAC TGAGGCTGCA
GTCCGCCTAT ATGAGTCGTT TGTCGAGGGG GACATCCACA CGACGGCAAA TGCAACGACC
GCTGAGTTTG TCAAGCTCAT CCAGAACACC TACCGCGATA CCAATATTGC CCTAGCCAAT
GAACTGGCCC AGTTGGCGCG GGACTACGAT ATTGATTCTC GAGAGGCGAT CCATCTGGCG
AACCAACATC CCAGAGTTGA GATTCACCAG CCTGGCCCGG GAGTTGGTGG GCACTGTTTG
CCGATTGATC CCTGGTTCCT TGGACAAAAT TCAGACAATC TGGATCTGAT CTCGACGGCC
CGCGAGATTA ACGACGGGAT GGTGGACTAC ATCGTTGACC TTGTTGGATC GACACTTGGG
ACGTTGGCCG GCAAACAGAT TGCTATTCTC GGGGTCGCAT ACAAGGGTAA TGTCGATGAT
ATCCGGAATA GCCCTGGCCT CGAAATCGCG CGACAACTTC AGTCGCTCCC TAGCGATACG
GCTACTCCGA TCTCCGCGGA CGGCGGGCAG GAAGCGGGTA TTCAGATCAA ACTTCATGAT
CCGCATGTGC AGGATCAGAC ATTGGATCTG GACTCACTAG CAGATGCCAC AGACGATGCA
GATGCGGTCA TCATTGCTAC CGACCACGAG GAATATACAG AGATTGATCC ACCGAAACTC
AAATCTCGAA TGGGCTCCAA GTTAGTCGTT GACACGAAGG CGATTTTAGA ACAATCGACA
TGGGAAGATG CGGGATTCAC CGTTATTCGT ATTTAG
 
Protein sequence
MSSVCVHGLG YIGLPTAAML ANYGHTVIGY DVDEELVNDL QAGQITFDEP GLQAFVTEAL 
ESGNLEVSDE VGPAKYHIIA VPTPFDEEAK VADISYIEAA GEAITPHLRP GDSVILESTV
PPGTTVNTLQ PVLEESGLAA GNDFALIHCP ETVLPGNIIT ELRENDRIIG GVNGVSTEAA
VRLYESFVEG DIHTTANATT AEFVKLIQNT YRDTNIALAN ELAQLARDYD IDSREAIHLA
NQHPRVEIHQ PGPGVGGHCL PIDPWFLGQN SDNLDLISTA REINDGMVDY IVDLVGSTLG
TLAGKQIAIL GVAYKGNVDD IRNSPGLEIA RQLQSLPSDT ATPISADGGQ EAGIQIKLHD
PHVQDQTLDL DSLADATDDA DAVIIATDHE EYTEIDPPKL KSRMGSKLVV DTKAILEQST
WEDAGFTVIR I