Gene Hmuk_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0081 
Symbol 
ID8409578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp77591 
End bp78865 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content56% 
IMG OID645018409 
Producttransposase IS4 family protein 
Protein accessionYP_003175929 
Protein GI257386156 
COG category[L] Replication, recombination and repair 
COG ID[COG3385] FOG: Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.985684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.077965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGGC TTACTACACT GTTTCCCTCC GAGTTCCTCG AAGAGCACGC CGAGGAACTC 
GGCGTGGTCG AACGTGATCG TGATCTTCAG ATTCTTATCC TCGTCTGGGC GCTCGTGTTC
GACTTCGCCA CAGGTGAGAA CCGAACACTC GCTGGATTCA GACGGAGCTA CAACTCGACG
GGTGACGAGA CACTCTCCCC TGGTGGCTTC TATCAGCGGT TAACGCCGAC ACTCGCAGCA
TATTTGCGCG ACCTCGTCGA GCGTGGTCTC GACGAGGTCG CTGTACCCAA CGCTGTTGAC
GCTGATATCG ACCGATTTAG GGATGTGATG ATTGCTGATG GAACCGTGTT GCGGTTGCAC
GAGTTCCTCT CTGAGGCGTA CGAAGGCCGC CACGAGGAGC AGGCTGGAGC ACGGCTCCAC
CTGCTCCACA ACGCCACCGA CCAGACAATT GAACGGAGCG ACGTGACTGA CGAGAAAACG
CACGACAGTA CGCTGTTCAA GACGGGGTCA TGGCTGCAAG GACGGCTGGT TCTGTTCGAT
CGCGCGTACT TCAAGTACCG CCGTTTTGCG CTGATCGACG AGAACGACGG CTACTTCGTG
AGTCGGCTGA AGCAGAACGC AAATCCGGTG ATAACGGCGG AATTACGGGA ATGGCGCGGG
CGCGCCATTC CCTTAGAGGG CAAGCAGATC CACGATGTGG TCACTGATCT CTCGCGGCAG
TACATTGACG TTGAGGTGGA GGCGGAGTTC AAGCGAGGAC AGTACGAGGG AACACGCTCG
CTAGACACGA AACGATTCCA CGTCGTTGTC GTCCGCGATG AGGACGCTGA CGACTACCAT
CTATACATTA CAAACCTGTC GAGAGAGGAG TTCCTTCCGG CAGATTTAGC AACGCTGTAT
CGGTGCCGCT GGGAGGTAGA AACGTTGTTT CGTGAGCTGA AGACACAGTA CGAGCTGGAC
GAATTCGACA CGAGCAACCC TGCTGTCGTG GAAATTCTGC TGTATGCGGC GTTGCTGTCG
CTGCTAGTGA GCCGTGATCT GTTAGATCTA GTCACCGAGC AGGCCGACGA TGAGATCGTA
TTTTCGCCGG AACGCTGGGA GGCGACCTTT CGGTTGCACG CCCAGCTCAT CCTCCACGAA
TTCGGCGAGT ACCTCGGCTA CTCGCCACCG CCGTTGCTGG AACGGCTGAT TGATGACGCA
CAAAAGATCC ACCAGCAACG ACCGATCTTA CAAGAGACGC TCTCTACCGT TACTCAACTG
AGGTGTGAGT CTTAG
 
Protein sequence
MRRLTTLFPS EFLEEHAEEL GVVERDRDLQ ILILVWALVF DFATGENRTL AGFRRSYNST 
GDETLSPGGF YQRLTPTLAA YLRDLVERGL DEVAVPNAVD ADIDRFRDVM IADGTVLRLH
EFLSEAYEGR HEEQAGARLH LLHNATDQTI ERSDVTDEKT HDSTLFKTGS WLQGRLVLFD
RAYFKYRRFA LIDENDGYFV SRLKQNANPV ITAELREWRG RAIPLEGKQI HDVVTDLSRQ
YIDVEVEAEF KRGQYEGTRS LDTKRFHVVV VRDEDADDYH LYITNLSREE FLPADLATLY
RCRWEVETLF RELKTQYELD EFDTSNPAVV EILLYAALLS LLVSRDLLDL VTEQADDEIV
FSPERWEATF RLHAQLILHE FGEYLGYSPP PLLERLIDDA QKIHQQRPIL QETLSTVTQL
RCES