Gene Hmuk_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0028 
Symbol 
ID8409524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp22433 
End bp23521 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content66% 
IMG OID645018365 
Producthistidine kinase 
Protein accessionYP_003175886 
Protein GI257386113 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.801683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA CCAAGCAGTC GCTGGGGCAG TCGTACGTCG TCGCGGCAGG CGTCGCCTTG 
AGTCTGGCGC TGCTGGGCCA CGCCGTCGTC GCGTCCGAGC ACGGCTGGCT AACTGCCGTC
CTGATCGTCG GTGGACTGGT GCCGGCGCTG ACGCTCGCTG GCGCGCAGTA CTGGCTCCCG
GCCAGTGGTA TCGAGGGCGA GCAAGTGTGG CGCGTCGCCG AGTGGAGCAG TCTCGGAATC
GGTATATTGA CACTAGTCAA CGTCGCGGTC CTCGCGTTCG GCCATCCACT GAGCGATCTC
GGACCGGTGG TGCTGGCGAC GAGCGTCGCC ATCGGCGGCA TAGCCGGTGT CCTCGTGGGG
ACGATGCTCG AACTGCGAAA CACCAACGCA CGGCTACAGC GGAGTAACGA CGTTCTCAAC
CGGGTGCTCC GGCACAACCT CCGCAACGAC CTGACCGTCG TCCTCGGCCA TCTGAGCGAA
CTCGAAGCCA ACGTCTCGGG ACAGCAGGCC GACCGCGTCC GGCAACTCGA AGGAAAAGTC
GACGAGATCG TCGCGACGAC GGAGAAGGCT CGCGAGATCG ACGTGGCACT CACCGCCGAA
CACCGAACGC AGCACCCTCT CGACGTGGTG TCCCACGTCA GGGAACGCGC CGAAGCGGTC
GAGACAGCCT ACCCGGACGC GACAGTCGAG ACCGACCTGC CAGAGTCGGC ATGGGTGTAC
GGGGACTGGC TCGTCGGGAC CGTCCTCGAC AACGTCGTCG AGAACGTGAT CGTCCACGCC
GAGGGCGACC CGTATCTCCG GATCGACTGC GAACGAGACG CCAGCGGTGT CACGGTTCGG
ATCGCCGACG ACTGTCCGCG GATTCCCGAC CACGAGCGCC CGATGTTCGA TCACGGTGTC
GAGACGCCAC TGAACCACTC GACCGGGGTC GGCCTCTGGC TCGTCCAGTC GGTCATGGAG
AGCTACGGCG GCGACGTGAC ACTGGCAGCC AGCGAGGCGG GCGGGAACCG GGTCGACCTG
ACGTTTCCGG CGGCACCGAG CGGGGACGAG GAACGGTTCT CCGATCGTCT GCGCCGAGCA
GAGCACTGA
 
Protein sequence
MDLTKQSLGQ SYVVAAGVAL SLALLGHAVV ASEHGWLTAV LIVGGLVPAL TLAGAQYWLP 
ASGIEGEQVW RVAEWSSLGI GILTLVNVAV LAFGHPLSDL GPVVLATSVA IGGIAGVLVG
TMLELRNTNA RLQRSNDVLN RVLRHNLRND LTVVLGHLSE LEANVSGQQA DRVRQLEGKV
DEIVATTEKA REIDVALTAE HRTQHPLDVV SHVRERAEAV ETAYPDATVE TDLPESAWVY
GDWLVGTVLD NVVENVIVHA EGDPYLRIDC ERDASGVTVR IADDCPRIPD HERPMFDHGV
ETPLNHSTGV GLWLVQSVME SYGGDVTLAA SEAGGNRVDL TFPAAPSGDE ERFSDRLRRA
EH