Gene Hmuk_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0022 
Symbol 
ID8409518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp17007 
End bp17903 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID645018359 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003175880 
Protein GI257386107 
COG category[S] Function unknown 
COG ID[COG1992] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.55201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.925385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTCG TCGAGGAGAT CGTCGTCGAC GAGTTCCTGC CAACCTTCAG GTCGCTGCTC 
GCGGAGGCGT TGCGCGAGCG TGACCTCACC CAGTCGGAGG TGGCCGAGCT GCTGGGGATC
AGCCAGAGCG CCGTCTCGAA GTACGCCCAC GGAGAGGTCG AGCGCAACGA GCGCCTGCTG
GAGAACGACC GGCTGGCGGC GCTGATCGAG GAGTTGGCCG ACGGGCTGGC CAGCGGCGAG
ATGACGCCCG TCCAGGCGTT GATCGAGACG GAAGTGGTCG TCCGCGAACT CGAACAGGGG
GGCACGCTCG CGGCGCTGCA CGAGGACGCC GTTCCGGAAC TCGCCGAGTA CGGCGGCGAC
TTCGCGGTCC ACGACCCCGA CAGCAATCTC CGGGAGGCAG AACAGACCCT CTCGTCGGTA
CGGCGCGGGC TGCGGCTGCT GGAGAACACC AGTGGCTTCG CCACGCTCAT TCCGGCGGTC
GGCTCCAACC TCGTCGAGGC CCTCAGCGAC GCGACAGGCA TCGAAGACGT GGCCGGCGTC
CCCGGTCGGA TCCTCGACGT GAAGGGGCGG GCGACGATCC CGGCCGAGCC GGAGTTCGGC
GTCAGCGAAC ACGTCGCGGG CGTGTTGCTC GCGGCACAGG CCGGCGGTGC GGACGCGAGC
GCGATGGTGA ACATCCGCTA CGACGACGGC GTCGTCGACG ACCTCGAAGC CGCGGGGTAC
ACGACGGTCG CGTTCGACGC CGAGGCCGAC ACCGAGACCG CGATCGGGGC CGCACTCGAC
GAGTGCCCGG ACGCCGACGT GCTCTACCAG ACCGGCGGCA TGGGAATCGA ACCGATCAGC
TACGTGATCG GGCCCGACGC CAGCGCCGTC GCGGAGATCG TCCGCGAGAT CGCGTGA
 
Protein sequence
MRFVEEIVVD EFLPTFRSLL AEALRERDLT QSEVAELLGI SQSAVSKYAH GEVERNERLL 
ENDRLAALIE ELADGLASGE MTPVQALIET EVVVRELEQG GTLAALHEDA VPELAEYGGD
FAVHDPDSNL REAEQTLSSV RRGLRLLENT SGFATLIPAV GSNLVEALSD ATGIEDVAGV
PGRILDVKGR ATIPAEPEFG VSEHVAGVLL AAQAGGADAS AMVNIRYDDG VVDDLEAAGY
TTVAFDAEAD TETAIGAALD ECPDADVLYQ TGGMGIEPIS YVIGPDASAV AEIVREIA